RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 H0Y858 1186 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 PLOD2O00469 737 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 CLDN5O00501 218 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 TNFRSF10BO14763 440 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 INPPL1O15357 1258 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 FGF10O15520 208 aaPredicted RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 IRAK2O43187 625 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 HNRNPRO43390 633 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 KLK8O60259 260 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 HUS1O60921 280 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 CPNE6O95741 557 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 MMP2P08253 660 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 ALDOCP09972 364 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 FAM200BP0CF97 657 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 MTHFD2P13995 350 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 IGFBP6P24592 240 aaPredicted RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 DCKP27707 260 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 MAPK1P28482 360 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 TTKP33981 857 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 PLA2G5P39877 138 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 KCNC1P48547 511 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 ERFP50548 548 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 CCT8P50990 548 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 NDST2P52849 883 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 NAA20P61599 178 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 DLX2Q07687 328 aaPredicted RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 FOXC1Q12948 553 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 BNIP2Q12982 314 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 ART3Q13508 389 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 DCTN2Q13561 401 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 PRPSAP1Q14558 356 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 NOMO2Q5JPE7 1267 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 COX20Q5RI15 118 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 ZNF678Q5SXM1 525 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 WSCD1Q658N2 575 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 ALG1LQ6GMV1 187 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 RWDD4Q6NW29 188 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 ELMSAN1Q6PJG2 1045 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 GK5Q6ZS86 529 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 LINC00299Q6ZSB3 139 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 OTOP3Q7RTS5 596 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 LYSMD3Q7Z3D4 306 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 CUZD1Q86UP6 607 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 TAC4Q86UU9 113 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 GPR180Q86V85 440 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 DENND6AQ8IWF6 608 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 SLC15A3Q8IY34 581 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 ADGRG5Q8IZF4 528 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 CLYBLQ8N0X4 340 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 SLC39A11Q8N1S5 342 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 UMODL1-AS1Q8N2C9 162 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 DNAAF3Q8N9W5 541 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 NETO2Q8NC67 525 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 PDPRQ8NCN5 879 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 TRPV3Q8NET8 790 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 TSPAN14Q8NG11 270 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 OR13J1Q8NGT2 312 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 OR2T34Q8NGX1 318 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 OR2T3Q8NH03 318 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 FNDC8Q8TC99 324 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 LRTOMTQ8WZ04 291 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.84□□□□□ -1.31
UBR4-212ENST00000475973 ISG20Q96AZ6 181 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 NMD3Q96D46 503 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 ITPKCQ96DU7 683 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 IMP4Q96G21 291 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 SLC39A13Q96H72 371 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 PCED1BQ96HM7 432 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 ZNF512Q96ME7 567 aaPredicted RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 FAM193BQ96PV7 902 aaPredicted RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 TCF12Q99081 682 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 PRPF18Q99633 342 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 OLFM1Q99784 485 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 TUBA1CQ9BQE3 449 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 ZCWPW1Q9H0M4 648 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 SLC25A51Q9H1U9 297 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 MFSD1Q9H3U5 465 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 NOL6Q9H6R4 1146 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 RNF19AQ9NV58 838 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 TBC1D13Q9NVG8 400 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 FAIMQ9NVQ4 179 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 GALNT8Q9NY28 637 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 IL37Q9NZH6 218 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 TMEM9Q9P0T7 183 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 OR12D3Q9UGF7 316 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 CROTQ9UKG9 612 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 PACSIN3Q9UKS6 424 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 CNOT6Q9ULM6 557 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 MYRFQ9Y2G1 1151 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 NDUFAF1Q9Y375 327 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 MTF2Q9Y483 593 aaPredicted RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 TRAF6Q9Y4K3 522 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 IPPQ9Y573 584 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 MYO18AQ92614 2054 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 TTC28Q96AY4 2481 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 PRRC2BQ5JSZ5 2229 aaKnown RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 IGLV3-10A0A075B6K4 115 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 A0A087WXM4 84 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 KANSL1LA0AUZ9 987 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ARHGEF37A1IGU5 675 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms