RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 MIR1-1HGQ9H1L0 117 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 OR51B5Q9H339 312 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 CLMPQ9H6B4 373 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 RUBCNLQ9H714 662 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 MLXIPQ9HAP2 919 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 LMBRD1Q9NUN5 540 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 FBXO34Q9NWN3 711 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 LRP2BPQ9P2M1 347 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 KCNN3Q9UGI6 736 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 ADAMTS6Q9UKP5 1117 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 RUVBL2Q9Y230 463 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PCDHA11Q9Y5I1 949 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 CNOT1A5YKK6 2376 aaKnown RBP6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 LTBP2Q14767 1821 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 TRBV23OR9-2A0A075B6M9 112 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 FAM234BA2RU67 622 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 DCDC2BA2VCK2 349 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 FAM170BA6NMN3 283 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 MAP2K7O14733 419 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 ALOX15BO15296 676 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 HTRA2O43464 458 aaPredicted RBP6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 SERPINI2O75830 405 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 ATE1O95260 518 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 LDLRP01130 860 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 CNPP09543 421 aaKnown RBP6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 IL9P15248 144 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 CYP3A5P20815 502 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 CDC25AP30304 524 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 HOXA9P31269 272 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 GPR4P46093 362 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 SERPINB9P50453 376 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 SMSP52788 366 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 NME5P56597 212 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 BCAR1P56945 870 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 KIAA1024LP59773 190 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 STX1BP61266 288 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 SKP1P63208 163 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 SF3A3Q12874 501 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 MYO1EQ12965 1108 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 IL18Q14116 193 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 CLCA4Q14CN2 919 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 TMEM132BQ14DG7 1078 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 PTPRRQ15256 657 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 DECR1Q16698 335 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 KLHL40Q2TBA0 621 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 KLHL26Q53HC5 615 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 PIP5KL1Q5T9C9 394 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 BTBD8Q5XKL5 378 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 PSRC1Q6PGN9 363 aaPredicted RBP6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 CES3Q6UWW8 571 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 CYP4V2Q6ZWL3 525 aaPredicted RBP6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 FAM122BQ7Z309 247 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 TMPRSS9Q7Z410 1059 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 ADHFE1Q8IWW8 467 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 STEAP2Q8NFT2 490 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 BBS10Q8TAM1 723 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 CPT1BQ92523 772 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 SLAMF9Q96A28 289 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 RASD2Q96D21 266 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 CHID1Q9BWS9 393 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 KRTAP4-6Q9BYQ5 205 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 IMPG2Q9BZV3 1241 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 PCMTD2Q9NV79 361 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 KLK14Q9P0G3 267 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 LNPEPQ9UIQ6 1025 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 GMEB2Q9UKD1 530 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 DNPEPQ9ULA0 475 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 STAP1Q9ULZ2 295 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 RNF24Q9Y225 148 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 NCKAP1Q9Y2A7 1128 aa6.06□□□□□ -1.44
SMARCE1-208ENST00000474246 C2orf92A0A1B0GVN3 265 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 TRIM49BA6NDI0 452 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 MEIS3P2A8K0S8 358 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 J3QKU1 62 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 TNPO2O14787 897 aaKnown RBP6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 DCLK1O15075 740 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 MATN3O15232 486 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 GPC4O75487 556 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 PSMD10O75832 226 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 AHSA1O95433 338 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 RAB3DO95716 219 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 ONECUT2O95948 504 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 MT-ATP6P00846 226 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 YES1P07947 543 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 ELNP15502 786 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 ATP2A2P16615 1042 aaKnown RBP6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 TYK2P29597 1187 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 HMGCLP35914 325 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 SLC1A4P43007 532 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 PIK3CGP48736 1102 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 PRKAA2P54646 552 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 ACTR2P61160 394 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 ZP2Q05996 745 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 SOX4Q06945 474 aaPredicted RBP6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 DCTN2Q13561 401 aaKnown RBP6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 PRKD1Q15139 912 aaPredicted RBP6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 XKR4Q5GH76 650 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 MARCH8Q5T0T0 291 aa6.05□□□□□ -1.44
SMARCE1-208ENST00000474246 ARMC12Q5T9G4 340 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms