RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 PRAMEP78395 509 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 SLC18A2Q05940 514 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 CYLC2Q14093 348 aaPredicted RBP14.73□□□□□ -0.05
LMNA-213ENST00000473598 SPIDRQ14159 915 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 ARSIQ5FYB1 569 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 SERPINA13PQ6UXR4 307 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 TTC30BQ8N4P2 665 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 TCP10LQ8TDR4 215 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 NRG4Q8WWG1 115 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 HDAC10Q969S8 669 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 SLC7A6OSQ96CW6 309 aaPredicted RBP14.73□□□□□ -0.05
LMNA-213ENST00000473598 SERAC1Q96JX3 654 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 KLHL32Q96NJ5 620 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 KLF6Q99612 283 aaPredicted RBP14.73□□□□□ -0.05
LMNA-213ENST00000473598 PITPNM3Q9BZ71 974 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 STX18Q9P2W9 335 aaKnown RBP14.73□□□□□ -0.05
LMNA-213ENST00000473598 LNPEPQ9UIQ6 1025 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 BPTFQ12830 3046 aa14.73□□□□□ -0.05
LMNA-213ENST00000473598 hCG_2014768A0A024R1R8 64 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 CAPN8A6NHC0 703 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 SPECC1L-ADORA2AF8WAN1 911 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 GOLGA8RI6L899 631 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 RPP40O75818 363 aaKnown RBP14.72□□□□□ -0.05
LMNA-213ENST00000473598 SNRPAP09012 282 aaKnown RBP14.72□□□□□ -0.05
LMNA-213ENST00000473598 PORP16435 677 aaPredicted RBP14.72□□□□□ -0.05
LMNA-213ENST00000473598 CNTFP26441 200 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 SERPINB3P29508 390 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 CTHP32929 405 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 HNF1BP35680 557 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 IL12RB1P42701 662 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 MTTPP55157 894 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 POLR2LP62875 67 aaKnown RBP14.72□□□□□ -0.05
LMNA-213ENST00000473598 TMPRSS15P98073 1019 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 THOC5Q13769 683 aaKnown RBP14.72□□□□□ -0.05
LMNA-213ENST00000473598 CFAP157Q5JU67 520 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 C9orf64Q5T6V5 341 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 GRTP1Q5TC63 336 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 BRAT1Q6PJG6 821 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 STRA8Q7Z7C7 330 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 NDUFAF2Q8N183 169 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 CALML6Q8TD86 181 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 SCRN2Q96FV2 425 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 MPP4Q96JB8 637 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 TBATAQ96M53 351 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 LYSMD1Q96S90 227 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 MFSD1Q9H3U5 465 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 INIPQ9NRY2 104 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 CKAP5Q14008 2032 aa14.72□□□□□ -0.05
LMNA-213ENST00000473598 HMX2A2RU54 273 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 ANTXRLA6NF34 631 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 CCL22O00626 93 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 HNRNPLP14866 589 aaKnown RBP eCLIP14.71□□□□□ -0.05
LMNA-213ENST00000473598 HMGCLP35914 325 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 TNFRSF4P43489 277 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 DNAJC3Q13217 504 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 RCN1Q15293 331 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 EGFLAMQ63HQ2 1017 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 NEPROQ6NW34 567 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 LYSMD3Q7Z3D4 306 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 OR4K2Q8NGD2 314 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 OR6P1Q8NGX9 317 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 GABPB2Q8TAK5 448 aaPredicted RBP14.71□□□□□ -0.05
LMNA-213ENST00000473598 DNASE1L2Q92874 299 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 ABTB1Q969K4 478 aaPredicted RBP14.71□□□□□ -0.05
LMNA-213ENST00000473598 MTBPQ96DY7 904 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 CDKN2AIPNLQ96HQ2 116 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 RBBP8Q99708 897 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 MCMBPQ9BTE3 642 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 GPR63Q9BZJ6 419 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 POLR3BQ9NW08 1133 aaPredicted RBP14.71□□□□□ -0.05
LMNA-213ENST00000473598 DUSP12Q9UNI6 340 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 USH1CQ9Y6N9 552 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 ATG2BQ96BY7 2078 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 A0A0U1RQS6 177 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 TSPAN11A1L157 253 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 HTR3EA5X5Y0 456 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 TRIM49D1C9J1S8 452 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 GOT2P00505 430 aaKnown RBP14.71□□□□□ -0.05
LMNA-213ENST00000473598 SLC4A1P02730 911 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 UBTFL6P0CB48 400 aaPredicted RBP14.71□□□□□ -0.05
LMNA-213ENST00000473598 PTPN4P29074 926 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 NEK3P51956 506 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 CDKN3Q16667 212 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 TMEM53Q6P2H8 277 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 TXNDC11Q6PKC3 985 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 FAM47EQ6ZV65 393 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 USP45Q70EL2 814 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 PTAR1Q7Z6K3 402 aaPredicted RBP14.71□□□□□ -0.05
LMNA-213ENST00000473598 RALGPS2Q86X27 583 aaPredicted RBP14.71□□□□□ -0.05
LMNA-213ENST00000473598 DENND6AQ8IWF6 608 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 STK40Q8N2I9 435 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 HCAR2Q8TDS4 363 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 EID2BQ96D98 161 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 APOPT1Q96IL0 206 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 MCCC1Q96RQ3 725 aaPredicted RBP14.71□□□□□ -0.05
LMNA-213ENST00000473598 ZFYVE1Q9HBF4 777 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 ZDHHC4Q9NPG8 344 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 HEBP1Q9NRV9 189 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 FAIMQ9NVQ4 179 aa14.71□□□□□ -0.05
LMNA-213ENST00000473598 CCDC162PA2VCL2 907 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms