RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 KCTD5Q9NXV2 234 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 ATXN10Q9UBB4 475 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 CNOT8Q9UFF9 292 aaKnown RBP12.46□□□□□ -0.41
TRAF4-209ENST00000473421 ADGRG1Q9Y653 693 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 PRRC2CQ9Y520 2896 aaKnown RBP12.46□□□□□ -0.42
TRAF4-209ENST00000473421 HIVEP3Q5T1R4 2406 aa12.46□□□□□ -0.42
TRAF4-209ENST00000473421 A0A1W2PQ67 120 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 PIPSLA2A3N6 862 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 TTLL8A6PVC2 850 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 EIF3CLB5ME19 914 aaKnown RBP12.45□□□□□ -0.42
TRAF4-209ENST00000473421 CREG1O75629 220 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 RFPL1O75677 317 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 NDUFA10O95299 355 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 CD48P09326 243 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 ANKRD34CP0C6C1 535 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 ZNF8P17098 575 aaPredicted RBP12.45□□□□□ -0.42
TRAF4-209ENST00000473421 IL4RP24394 825 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 HSPA9P38646 679 aaKnown RBP12.45□□□□□ -0.42
TRAF4-209ENST00000473421 EPHA4P54764 986 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 BECN1Q14457 450 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 DPYSL2Q16555 572 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 PLA2G4EQ3MJ16 856 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 FKBP15Q5T1M5 1219 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 HENMT1Q5T8I9 393 aaKnown RBP12.45□□□□□ -0.42
TRAF4-209ENST00000473421 MARC1Q5VT66 337 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 FAM69BQ5VUD6 431 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 TMCO3Q6UWJ1 677 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 CERS6Q6ZMG9 384 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 SLC9B2Q86UD5 537 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 NLRP8Q86W28 1048 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 CPNE8Q86YQ8 564 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 LZTR1Q8N653 840 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 ARRDC2Q8TBH0 407 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 CPT1CQ8TCG5 803 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 RSC1A1Q92681 617 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 EIF3CQ99613 913 aaKnown RBP12.45□□□□□ -0.42
TRAF4-209ENST00000473421 TWSG1Q9GZX9 223 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 BRD8Q9H0E9 1235 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 HSD3B7Q9H2F3 369 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 ZWILCHQ9H900 591 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 VPS18Q9P253 973 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 POLHQ9Y253 713 aa12.45□□□□□ -0.42
TRAF4-209ENST00000473421 LRBAP50851 2863 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 PCSK5Q92824 1860 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 LGALS16A8MUM7 142 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 NUAK1O60285 661 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 VPS4BO75351 444 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 SPAG6O75602 509 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 RARAP10276 462 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 BRAFP15056 766 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 UBXN1Q04323 297 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 ITKQ08881 620 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 MRPL49Q13405 166 aaKnown RBP12.44□□□□□ -0.42
TRAF4-209ENST00000473421 SEMA5AQ13591 1074 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 PEX6Q13608 980 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 DNASE1L3Q13609 305 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 LAMB3Q13751 1172 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 KCNAB1Q14722 419 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 EIF2S3LQ2VIR3 472 aaKnown RBP12.44□□□□□ -0.42
TRAF4-209ENST00000473421 KHDC1Q4VXA5 237 aaKnown RBP12.44□□□□□ -0.42
TRAF4-209ENST00000473421 FHL5Q5TD97 284 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 FAM92BQ6ZTR7 304 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 TMEM26Q6ZUK4 368 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 RASGRP3Q8IV61 690 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 ATPAF2Q8N5M1 289 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 GALNT11Q8NCW6 608 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 SSC4DQ8WTU2 575 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 BTBD6Q96KE9 485 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 ZNF768Q9H5H4 540 aaKnown RBP12.44□□□□□ -0.42
TRAF4-209ENST00000473421 PCDH18Q9HCL0 1135 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 KLC4Q9NSK0 619 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRAF4-209ENST00000473421 LNPEPQ9UIQ6 1025 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 VPS4AQ9UN37 437 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 MAP4K5Q9Y4K4 846 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 PCDHB3Q9Y5E6 796 aa12.44□□□□□ -0.42
TRAF4-209ENST00000473421 LILRA5A6NI73 299 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 OR52A4PA6NMU1 304 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 TCP11X1B4DZS4 312 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 H3BRJ5 948 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 DDX3XO00571 662 aaKnown RBP eCLIP12.43□□□□□ -0.422e-10■□□□□ 10.6
TRAF4-209ENST00000473421 GRID2O43424 1007 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 MTX2O75431 263 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 RNF8O76064 485 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 SORBS2O94875 1100 aaKnown RBP12.43□□□□□ -0.42
TRAF4-209ENST00000473421 UBXN7O94888 489 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 CLDN1O95832 211 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 FTLP02792 175 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-209ENST00000473421 FGF5P12034 268 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 FOLR1P15328 257 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 MAN1A1P33908 653 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 SPINT3P49223 89 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 IL10RAQ13651 578 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 SEPT7Q16181 437 aaKnown RBP12.43□□□□□ -0.42
TRAF4-209ENST00000473421 PWWP2BQ6NUJ5 590 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 CRTC3Q6UUV7 619 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 ZNF571Q7Z3V5 609 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-209ENST00000473421 PLXDC1Q8IUK5 500 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 PSTKQ8IV42 348 aaKnown RBP12.43□□□□□ -0.42
TRAF4-209ENST00000473421 LPCAT1Q8NF37 534 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms