RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 PCDHB1Q9Y5F3 818 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 ARHGEF17Q96PE2 2063 aaPredicted RBP9.12□□□□□ -0.95
SMC4-213ENST00000472282 DMXL2Q8TDJ6 3036 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 CACNA1GO43497 2377 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 ZZEF1O43149 2961 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 A0A0U1RQS6 177 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 CAPN8A6NHC0 703 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 NPIPB15A6NHN6 443 aaPredicted RBP9.11□□□□□ -0.95
SMC4-213ENST00000472282 PDE2AO00408 941 aaPredicted RBP9.11□□□□□ -0.95
SMC4-213ENST00000472282 GNB5O14775 395 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 SCAMP1O15126 338 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 ANXA9O76027 345 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 TM7SF2O76062 418 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 METTL18O95568 372 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 NDST3O95803 873 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 MT-CO3P00414 261 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 ELFN1P0C7U0 828 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 ZSCAN5DPP0CG00 497 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 CYP2A6P11509 494 aaPredicted RBP9.11□□□□□ -0.95
SMC4-213ENST00000472282 CKMT1AP12532 417 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 C6P13671 934 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 LHCGRP22888 699 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 NFKBIAP25963 317 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 ITPKBP27987 946 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 STIP1P31948 543 aaKnown RBP9.11□□□□□ -0.95
SMC4-213ENST00000472282 VIPR1P32241 457 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 ACTN2P35609 894 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 HNF1BP35680 557 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 COILP38432 576 aaPredicted RBP9.11□□□□□ -0.95
SMC4-213ENST00000472282 RABIFP47224 123 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 LIG3P49916 1009 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 RPL26P61254 145 aaKnown RBP9.11□□□□□ -0.95
SMC4-213ENST00000472282 SGCGQ13326 291 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 ILKQ13418 452 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 OLIG2Q13516 323 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 PRPSAP1Q14558 356 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 RTP5Q14D33 572 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 IRF4Q15306 451 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 CNGA3Q16281 694 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 DEFB133Q30KQ1 61 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 CDCP2Q5VXM1 449 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 CCDC137Q6PK04 289 aaKnown RBP9.11□□□□□ -0.95
SMC4-213ENST00000472282 CRTC1Q6UUV9 634 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 USP45Q70EL2 814 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 GSTA5Q7RTV2 222 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 TSPAN33Q86UF1 283 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 PDZD3Q86UT5 571 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 NDUFAF2Q8N183 169 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 DCBLD1Q8N8Z6 715 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 DENND6BQ8NEG7 585 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 LMX1AQ8TE12 382 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 NXPE2Q96DL1 559 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 FICDQ9BVA6 458 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 CLPBQ9H078 707 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 DDX47Q9H0S4 455 aaKnown RBP9.11□□□□□ -0.95
SMC4-213ENST00000472282 RPL26L1Q9UNX3 145 aaKnown RBP9.11□□□□□ -0.95
SMC4-213ENST00000472282 CLCA2Q9UQC9 943 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 PPIL1Q9Y3C6 166 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 FAM208BQ5VWN6 2430 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 PIKFYVEQ9Y2I7 2098 aa9.11□□□□□ -0.95
SMC4-213ENST00000472282 CHD6Q8TD26 2715 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 A0A087WV48 116 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 GOLGA6CA6NDK9 693 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 GOLGA6BA6NDN3 693 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 ANKRD66B4E2M5 251 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 AQP9O43315 295 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 LZTS3O60299 673 aaPredicted RBP9.1□□□□□ -0.95
SMC4-213ENST00000472282 OPA1O60313 960 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 USP12O75317 370 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 HEXIM1O94992 359 aaKnown RBP9.1□□□□□ -0.95
SMC4-213ENST00000472282 SLC4A1P02730 911 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 PIRTP0C851 137 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 GOLGA6DP0CG33 693 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 CDK4P11802 303 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 GM2AP17900 193 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 RPL22P35268 128 aaKnown RBP9.1□□□□□ -0.95
SMC4-213ENST00000472282 FDFT1P37268 417 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 PAFAH1B1P43034 410 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 CHRNA4P43681 627 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 TNNT3P45378 269 aaPredicted RBP9.1□□□□□ -0.95
SMC4-213ENST00000472282 FNTAP49354 379 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 HNRNPKP61978 463 aaKnown RBP eCLIP9.1□□□□□ -0.955e-13■■■■■ 46
SMC4-213ENST00000472282 ARHGEF7Q14155 803 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 TCEA2Q15560 299 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 CDKN3Q16667 212 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 PARP6Q2NL67 630 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 WSCD2Q2TBF2 565 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 SIRPB2Q5JXA9 342 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 PERM1Q5SV97 790 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 LRRC66Q68CR7 880 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 DENND2CQ68D51 928 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 GUSBP11Q6P575 273 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 LIPIQ6XZB0 460 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 ZSCAN30Q86W11 494 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 DCP2Q8IU60 420 aaKnown RBP9.1□□□□□ -0.95
SMC4-213ENST00000472282 KLHDC8BQ8IXV7 354 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 PHACTR4Q8IZ21 702 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 SLC25A41Q8N5S1 370 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 FAM181AQ8N9Y4 354 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 ATL2Q8NHH9 583 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms