RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 RIOK2Q9BVS4 552 aaKnown RBP6.79□□□□□ -1.32
HDAC1-204ENST00000471488 ABCG8Q9H221 673 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 DHX35Q9H5Z1 703 aaKnown RBP6.79□□□□□ -1.32
HDAC1-204ENST00000471488 PDFQ9HBH1 243 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 KCTD5Q9NXV2 234 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 KIAA1468Q9P260 1216 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 ENTPD4Q9Y227 616 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 SIK3Q9Y2K2 1263 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 PCDHGA6Q9Y5G7 932 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 PCYT1BQ9Y5K3 369 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-204ENST00000471488 ATP6V1DQ9Y5K8 247 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 FHOD1Q9Y613 1164 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 CROCCQ5TZA2 2017 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 MN1Q10571 1320 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 OTOGQ6ZRI0 2925 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 KIR2DS5A0A0G2JLQ3 304 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 A0A0G2JNG1 304 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 C2CD4BA6NLJ0 364 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 KIR2DS3K7RE56 304 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 TRAFD1O14545 582 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 SCRG1O75711 98 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 MTA2O94776 668 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 GFPT2O94808 682 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 LSM8O95777 96 aaKnown RBP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 KLK3P07288 261 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 ANKRD34CP0C6C1 535 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 FGF5P12034 268 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 F3P13726 295 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 FOLR1P15328 257 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 RPL10P27635 214 aaKnown RBP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 RFC1P35251 1148 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 NSFP46459 744 aaKnown RBP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 RENBPP51606 427 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 NDST2P52849 883 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 DRG2P55039 364 aaKnown RBP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 NOMO3P69849 1222 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 SLC10A7Q0GE19 358 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 TRAF2Q12933 501 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 ATP1A4Q13733 1029 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 KIR2DS5Q14953 304 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 PLCL1Q15111 1095 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 LLGL1Q15334 1064 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 PPP6R3Q5H9R7 873 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 ZNF648Q5T619 568 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 ARMC12Q5T9G4 340 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 ADAMTSL4Q6UY14 1074 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 TMEM26Q6ZUK4 368 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 BNIPLQ7Z465 357 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 FAM71AQ8IYT1 594 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 NDUFAF2Q8N183 169 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 UMODL1-AS1Q8N2C9 162 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 BBS5Q8N3I7 341 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 ENDOVQ8N8Q3 282 aaKnown RBP6.78□□□□□ -1.32
HDAC1-204ENST00000471488 EXD1Q8NHP7 514 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 NSMCE1Q8WV22 266 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 CLIP3Q96DZ5 547 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 ZDHHC12Q96GR4 267 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 NSMCE3Q96MG7 304 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 MCEEQ96PE7 176 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 PLEKHG4BQ96PX9 1271 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 GPR87Q9BY21 358 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 VPS16Q9H269 839 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 CHST8Q9H2A9 424 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 EPB41L1Q9H4G0 881 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 LRRC19Q9H756 370 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 AGPAT4Q9NRZ5 378 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 SOHLH2Q9NX45 425 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 OGFRQ9NZT2 677 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 ADAM22Q9P0K1 906 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 COPG2Q9UBF2 871 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 PCSK1NQ9UHG2 260 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 FZD10Q9ULW2 581 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 B3GNT3Q9Y2A9 372 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 SLC30A1Q9Y6M5 507 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 ITPR3Q14573 2671 aa6.78□□□□□ -1.32
HDAC1-204ENST00000471488 UBA6A0AVT1 1052 aaPredicted RBP6.77□□□□□ -1.33
HDAC1-204ENST00000471488 LILRA5A6NI73 299 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 WASH4PA8MWX3 477 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 GRID2O43424 1007 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 CPNE3O75131 537 aaKnown RBP6.77□□□□□ -1.33
HDAC1-204ENST00000471488 NADKO95544 446 aaPredicted RBP6.77□□□□□ -1.33
HDAC1-204ENST00000471488 SOD1P00441 154 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 C9P02748 559 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 ALPPP05187 535 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 COX6B1P14854 86 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 CDH5P33151 784 aaPredicted RBP6.77□□□□□ -1.33
HDAC1-204ENST00000471488 PTPN9P43378 593 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 CSNK1DP48730 415 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 RRADP55042 308 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 PPP1CAP62136 330 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 SYCP1Q15431 976 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 ZRSR2Q15696 482 aaKnown RBP6.77□□□□□ -1.33
HDAC1-204ENST00000471488 GPR19Q15760 415 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 ALS2CLQ60I27 953 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 DNAJC24Q6P3W2 148 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 DCUN1D2Q6PH85 259 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 WDR59Q6PJI9 974 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 CERS6Q6ZMG9 384 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 ZNF517Q6ZMY9 492 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms