RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 BPIFA1Q9NP55 256 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 C20orf141Q9NUB4 165 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 HSPB7Q9UBY9 170 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 RCOR1Q9UKL0 485 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 NRAPQ86VF7 1730 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 MEGF6O75095 1541 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 AFF2P51816 1311 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 PCDH11XQ9BZA7 1347 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 PCDH11YQ9BZA8 1340 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 TAF1P21675 1872 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 CEMIPQ8WUJ3 1361 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 A0A1W2PS18 150 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 TMEM202A6NGA9 273 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 ERVV-2B6SEH9 535 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 SOCS5O75159 536 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 TACC1O75410 805 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 TFP02787 698 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 RRM1P23921 792 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 CLCNKAP51800 687 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 TEFQ10587 303 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 CAMK1Q14012 370 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 CTF1Q16619 201 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 KRTAP27-1Q3LI81 207 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 MMEL1Q495T6 779 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 PAPPA-AS1Q5QFB9 102 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 ZNF772Q68DY9 489 aaPredicted RBP5.47□□□□□ -1.53
CCDC39-202ENST00000471307 PLEKHA7Q6IQ23 1121 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 KRTAP5-11Q6L8G4 156 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 ANKRD54Q6NXT1 300 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 METTL2BQ6P1Q9 378 aaKnown RBP5.47□□□□□ -1.53
CCDC39-202ENST00000471307 WDR73Q6P4I2 378 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 TAOK1Q7L7X3 1001 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 METTL2AQ96IZ6 378 aaKnown RBP5.47□□□□□ -1.53
CCDC39-202ENST00000471307 H2AFJQ9BTM1 129 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 PPCSQ9HAB8 311 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.47□□□□□ -1.53
CCDC39-202ENST00000471307 PARP4Q9UKK3 1724 aaKnown RBP5.47□□□□□ -1.53
CCDC39-202ENST00000471307 DISP2A7MBM2 1401 aa5.47□□□□□ -1.53
CCDC39-202ENST00000471307 PKD1L3Q7Z443 1732 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 XPNPEP2O43895 674 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 HOXB5P09067 269 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 EDN2P20800 178 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 MAOAP21397 527 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 ARL1P40616 181 aaPredicted RBP5.46□□□□□ -1.54
CCDC39-202ENST00000471307 USP8P40818 1118 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 RNPS1Q15287 305 aaKnown RBP5.46□□□□□ -1.54
CCDC39-202ENST00000471307 PMS2CLQ68D20 193 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 SLC22A25Q6T423 547 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 CYP26C1Q6V0L0 522 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 SATL1Q86VE3 508 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 SLC35F3Q8IY50 421 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 TTC14Q96N46 770 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 SCLT1Q96NL6 688 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 THUMPD2Q9BTF0 503 aaKnown RBP5.46□□□□□ -1.54
CCDC39-202ENST00000471307 PLEKHA4Q9H4M7 779 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 TINAGQ9UJW2 476 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 FBXO9Q9UK97 447 aaPredicted RBP5.46□□□□□ -1.54
CCDC39-202ENST00000471307 ADAM18Q9Y3Q7 739 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 LAS1LQ9Y4W2 734 aaKnown RBP5.46□□□□□ -1.54
CCDC39-202ENST00000471307 DGKBQ9Y6T7 804 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 KAT6BQ8WYB5 2073 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 SOS1Q07889 1333 aaPredicted RBP5.46□□□□□ -1.54
CCDC39-202ENST00000471307 FANCIQ9NVI1 1328 aa5.46□□□□□ -1.54
CCDC39-202ENST00000471307 PRR23AA6NEV1 266 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 SH3BP5O60239 455 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 CRYAAP02489 173 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 COX7A2P14406 83 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 IL15P40933 162 aaPredicted RBP5.45□□□□□ -1.54
CCDC39-202ENST00000471307 METAP2P50579 478 aaKnown RBP eCLIP5.45□□□□□ -1.54
CCDC39-202ENST00000471307 EFNA5P52803 228 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 PPP2R5BQ15173 497 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 CCDC6Q16204 474 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 TRNP1Q6NT89 227 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 TICAM2Q86XR7 235 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 FOXRED2Q8IWF2 684 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 ZBTB2Q8N680 514 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 UBXN10Q96LJ8 280 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 TTYH1Q9H313 450 aaPredicted RBP5.45□□□□□ -1.54
CCDC39-202ENST00000471307 KLHL1Q9NR64 748 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 MPP6Q9NZW5 540 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 CTNNAL1Q9UBT7 734 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 TSPYL4Q9UJ04 414 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 TBX20Q9UMR3 447 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 LSM4Q9Y4Z0 139 aaKnown RBP5.45□□□□□ -1.54
CCDC39-202ENST00000471307 ATRNO75882 1429 aa5.45□□□□□ -1.54
CCDC39-202ENST00000471307 SCN11AQ9UI33 1791 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 ADAMTS7Q9UKP4 1686 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 VIRMAQ69YN4 1812 aaKnown RBP5.44□□□□□ -1.54
CCDC39-202ENST00000471307 KIF26BQ2KJY2 2108 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 TTC36A6NLP5 189 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 GAS8-AS1O95177 125 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 CETPP11597 493 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 KCNA5P22460 613 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 SHMT1P34896 483 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 UFM1P61960 85 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 PHEXP78562 749 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 RBM39Q14498 530 aaKnown RBP5.44□□□□□ -1.54
CCDC39-202ENST00000471307 RBBP5Q15291 538 aaKnown RBP5.44□□□□□ -1.54
CCDC39-202ENST00000471307 KCNT1Q5JUK3 1230 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 KCTD18Q6PI47 426 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms