RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 TMEM9Q9P0T7 183 aa8.87□□□□□ -0.99
SYNGAP1-205ENST00000470232 RNF14Q9UBS8 474 aa8.87□□□□□ -0.99
SYNGAP1-205ENST00000470232 CROTQ9UKG9 612 aa8.87□□□□□ -0.99
SYNGAP1-205ENST00000470232 PCDHGA9Q9Y5G4 932 aaKnown RBP8.87□□□□□ -0.99
SYNGAP1-205ENST00000470232 ANKRD36A6QL64 1941 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 OTOGQ6ZRI0 2925 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 TSPAN11A1L157 253 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 GOLGA6BA6NDN3 693 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 GOLGA8KD6RF30 607 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 PALMO75781 387 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 PIGNO95427 931 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 SYF2O95926 243 aaKnown RBP8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 CEACAM5P06731 702 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 MYBL2P10244 700 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 TFE3P19532 575 aaPredicted RBP8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 F8A1P23610 371 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 NFKBIAP25963 317 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 AK4P27144 223 aaPredicted RBP8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 CSF2RBP32927 897 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 ACTR1BP42025 376 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 FASLGP48023 281 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 ACTR1AP61163 376 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 CTBSQ01459 385 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 FOXM1Q08050 763 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 MRPL49Q13405 166 aaKnown RBP8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 ACOX1Q15067 660 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 KRTAP21-3Q3LHN1 58 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 NADK2Q4G0N4 442 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 GLE1Q53GS7 698 aaKnown RBP8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 FAM102AQ5T9C2 384 aaPredicted RBP8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 OTUD1Q5VV17 481 aaPredicted RBP8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 CYB5D1Q6P9G0 228 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 LIPIQ6XZB0 460 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 FAM131BQ86XD5 332 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 FAM76AQ8TAV0 307 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 VOPP1Q96AW1 172 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 C18orf8Q96DM3 657 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 TUBGCP5Q96RT8 1024 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 RUFY1Q96T51 708 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 LRRC1Q9BTT6 524 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 LGR4Q9BXB1 951 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 TLR10Q9BXR5 811 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 TSPYL1Q9H0U9 437 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 EPB41L1Q9H4G0 881 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 ATP13A3Q9H7F0 1226 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 APMAPQ9HDC9 416 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 ACSS2Q9NR19 701 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 ERRFI1Q9UJM3 462 aaPredicted RBP8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 PADI1Q9ULC6 663 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 SUFUQ9UMX1 484 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 PCDHGA6Q9Y5G7 932 aa8.86□□□□□ -0.99
SYNGAP1-205ENST00000470232 GRID2IPA4D2P6 1211 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 INSIG1O15503 277 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 SORBS2O94875 1100 aaKnown RBP8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 FTCDO95954 541 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 PDGFAP04085 211 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 FURINP09958 794 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 SERPINA4P29622 427 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 CXCR5P32302 372 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 ADCY8P40145 1251 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 CCL11P51671 97 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 YBEYP58557 167 aaPredicted RBP8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 BPIFB4P59827 614 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 SLC7A5Q01650 507 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 IL11RAQ14626 422 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 IFI16Q16666 785 aaKnown RBP8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 PTPN20Q4JDL3 420 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 ZRANB3Q5FWF4 1079 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 PPP1R15BQ5SWA1 713 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 AFMIDQ63HM1 303 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 ZC3H18Q86VM9 953 aaKnown RBP8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 NLRP14Q86W24 1093 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 PLXDC1Q8IUK5 500 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 RASGRP3Q8IV61 690 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 IFT20Q8IY31 132 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 LZTR1Q8N653 840 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 TMEM35BQ8NCS4 154 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 PATE1Q8WXA2 126 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 TBC1D31Q96DN5 1066 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 ACP6Q9NPH0 428 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 PLCB1Q9NQ66 1216 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 NDFIP2Q9NV92 336 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 DMGDHQ9UI17 866 aaKnown RBP8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 HIVEP3Q5T1R4 2406 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 ITPR3Q14573 2671 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 SHANK1Q9Y566 2161 aa8.85□□□□□ -0.99
SYNGAP1-205ENST00000470232 GOLGA6CA6NDK9 693 aa8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 C21orf140B9A014 251 aa8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 BUB1BO60566 1050 aaPredicted RBP8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 GOLGA6DP0CG33 693 aa8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 SLC2A4P14672 509 aa8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 GRNP28799 593 aaKnown RBP8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 ADRA1BP35368 520 aa8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 GARSP41250 739 aaKnown RBP8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 GABRB2P47870 512 aa8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 CSNK1DP48730 415 aa8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 EPHA4P54764 986 aa8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 PER3P56645 1201 aa8.84□□□□□ -0.99
SYNGAP1-205ENST00000470232 MRPS25P82663 173 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms