RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 GOLPH3Q9H4A6 298 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 KCNK4Q9NYG8 393 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 SEPT10Q9P0V9 454 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 PDP2Q9P2J9 529 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 SAE1Q9UBE0 346 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-208ENST00000469802 TBC1D29Q9UFV1 150 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 ZNHIT2Q9UHR6 403 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 ALG6Q9Y672 507 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 ZNF462Q96JM2 2506 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 GPR89AB7ZAQ6 455 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 NDST3O95803 873 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 GPR89BP0CG08 455 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 CCL4P13236 92 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 TNNT1P13805 278 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 CD82P27701 267 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 CD68P34810 354 aaPredicted RBP16.13■□□□□ 0.17
COL9A3-208ENST00000469802 ARSDP51689 593 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 C19orf57Q0VDD7 668 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 BIRC2Q13490 618 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 TFDP2Q14188 446 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 PCSK7Q16549 785 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 C11orf63Q6NUN7 778 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 SPOCD1Q6ZMY3 1216 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 BZW1Q7L1Q6 419 aaKnown RBP16.13■□□□□ 0.17
COL9A3-208ENST00000469802 CHST15Q7LFX5 561 aaPredicted RBP16.13■□□□□ 0.17
COL9A3-208ENST00000469802 KATNAL2Q8IYT4 538 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 ZNF843Q8N446 348 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 TRAM1L1Q8N609 369 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 HERPUD2Q9BSE4 406 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 ANP32EQ9BTT0 268 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 SARS2Q9NP81 518 aaKnown RBP16.13■□□□□ 0.17
COL9A3-208ENST00000469802 RAD18Q9NS91 495 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 TMEM9Q9P0T7 183 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 ATXN10Q9UBB4 475 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 SHOC2Q9UQ13 582 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 KCNK6Q9Y257 313 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 SPO11Q9Y5K1 396 aa16.13■□□□□ 0.17
COL9A3-208ENST00000469802 hCG_1818297A0A087WSY0 165 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 PRR19A6NJB7 356 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 AGRPO00253 132 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 CHUKO15111 745 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 GRID2O43424 1007 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 CST8O60676 142 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 ACP5P13686 325 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 F3P13726 295 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 ZNF8P17098 575 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-208ENST00000469802 BPIP17213 487 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 MAGEA1P43355 309 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 MARCKSL1P49006 195 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 CLCNKAP51800 687 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 MAPK10P53779 464 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 HHEXQ03014 270 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 SRSF6Q13247 344 aaKnown RBP16.12■□□□□ 0.17
COL9A3-208ENST00000469802 TAF1BQ53T94 588 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-208ENST00000469802 ODF2Q5BJF6 829 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 TFDP3Q5H9I0 405 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 KIAA1614Q5VZ46 1190 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 ALS2CLQ60I27 953 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 IYDQ6PHW0 289 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 KDELC1Q6UW63 502 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 KDELC2Q7Z4H8 507 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 ZNF761Q86XN6 746 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-208ENST00000469802 TFB1MQ8WVM0 346 aaKnown RBP16.12■□□□□ 0.17
COL9A3-208ENST00000469802 GLYATL1Q969I3 302 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 PMEPA1Q969W9 287 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 SRPK1Q96SB4 655 aaKnown RBP16.12■□□□□ 0.17
COL9A3-208ENST00000469802 SPATA16Q9BXB7 569 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 AKAP7Q9P0M2 348 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-208ENST00000469802 PCDHGA3Q9Y5H0 932 aa16.12■□□□□ 0.17
COL9A3-208ENST00000469802 PIEZO2Q9H5I5 2752 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 LOC285095A0A1B0GVY8 99 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 AURKAO14965 403 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 MTSS1O43312 755 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 DUX1O43812 170 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 PMPCBO75439 489 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 SLC4A1P02730 911 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 FGF3P11487 239 aaPredicted RBP16.11■□□□□ 0.17
COL9A3-208ENST00000469802 TMEM71Q6P5X7 295 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 ADGRG6Q86SQ4 1221 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 ZFAND4Q86XD8 727 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 PHYKPLQ8IUZ5 450 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 AGBL5Q8NDL9 886 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 QKIQ96PU8 341 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL9A3-208ENST00000469802 PLEKHG4BQ96PX9 1271 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 SLC38A3Q99624 504 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 GPR63Q9BZJ6 419 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 OR2AG1Q9H205 316 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 TRIM39Q9HCM9 518 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 ARFGAP3Q9NP61 516 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 TFR2Q9UP52 801 aa16.11■□□□□ 0.17
COL9A3-208ENST00000469802 TRBV23OR9-2A0A075B6M9 112 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 KIR2DS5A0A0G2JLQ3 304 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 A0A0G2JNG1 304 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 KIR2DS3K7RE56 304 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 SLC25A14O95258 325 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-208ENST00000469802 EPOP01588 193 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 SLC2A4P14672 509 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 NFKB1P19838 968 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 FECHP22830 423 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 EPHA4P54764 986 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms