RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 PLXDC1Q8IUK5 500 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 MAML1Q92585 1016 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 C9orf72Q96LT7 481 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 LYSMD1Q96S90 227 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 RMI1Q9H9A7 625 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 MRPL47Q9HD33 250 aaKnown RBP12.93□□□□□ -0.34
PTPN7-207ENST00000468385 LMBRD1Q9NUN5 540 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 CPNE7Q9UBL6 633 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 CROTQ9UKG9 612 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 DNPEPQ9ULA0 475 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 LRRK2Q5S007 2527 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 OR5K4A6NMS3 321 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 GRID2O43424 1007 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 MFSD11O43934 449 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 NUAK1O60285 661 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 PRKCIP41743 596 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 SPINT3P49223 89 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 MLLT10P55197 1068 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 SLC25A11Q02978 314 aaKnown RBP12.92□□□□□ -0.34
PTPN7-207ENST00000468385 FOXM1Q08050 763 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 TCTN3Q6NUS6 607 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 C6orf15Q6UXA7 325 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-207ENST00000468385 LRRC49Q8IUZ0 686 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPN7-207ENST00000468385 ARRDC2Q8TBH0 407 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 TEKT4Q8WW24 435 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 PLEKHG4BQ96PX9 1271 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 ULBP3Q9BZM4 244 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 CARD9Q9H257 536 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 UCK1Q9HA47 277 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 PRDM8Q9NQV8 689 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 AIPL1Q9NZN9 384 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 SCHIP1Q9P0W5 487 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-207ENST00000468385 PCDHB3Q9Y5E6 796 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 ADGRG1Q9Y653 693 aa12.92□□□□□ -0.34
PTPN7-207ENST00000468385 CD48P09326 243 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 MYBL1P10243 752 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 CES1P23141 567 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 GARSP41250 739 aaKnown RBP12.91□□□□□ -0.34
PTPN7-207ENST00000468385 CLCNKAP51800 687 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 SH3BP2P78314 561 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 NIPAL4Q0D2K0 466 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 GALNT2Q10471 571 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 MMRN1Q13201 1228 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 ERV3-1Q14264 604 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 NCBP2-AS2Q69YL0 99 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 TMEM26Q6ZUK4 368 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 TMEM135Q86UB9 458 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 ATCAYQ86WG3 371 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 CCDC13Q8IYE1 715 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 TEX19Q8NA77 164 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 AVL9Q8NBF6 648 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 GALNT6Q8NCL4 622 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 LPCAT1Q8NF37 534 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 FAM71BQ8TC56 605 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 TRIM11Q96F44 468 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 BTBD6Q96KE9 485 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 ISCUQ9H1K1 167 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 FAM83DQ9H4H8 585 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 PCDH9Q9HC56 1237 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 ANO10Q9NW15 660 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 RBM22Q9NW64 420 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPN7-207ENST00000468385 ATXN10Q9UBB4 475 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 POLHQ9Y253 713 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 SLC30A1Q9Y6M5 507 aa12.91□□□□□ -0.34
PTPN7-207ENST00000468385 C1orf232A0A0U1RR37 186 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 RGSL1A5PLK6 1076 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 GOLGA6L3A6NEY3 463 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 MKRN2OSH3BPM6 223 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 MATN3O15232 486 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 TOX3O15405 576 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 KIAA0754O94854 1291 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 UBXN7O94888 489 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 HLA-DQB2P05538 268 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 KRT7P08729 469 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 ZNF8P17098 575 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 TYRP1P17643 537 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 XRCC1P18887 633 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 SLC19A1P41440 591 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 NOP2P46087 812 aaKnown RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 SEPHS1P49903 392 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 ZNF165P49910 485 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 RPL26P61254 145 aaKnown RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 PIGHQ14442 188 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 KRT81Q14533 505 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 PAFAH1B3Q15102 231 aaKnown RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 STX1AQ16623 288 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 QPCTQ16769 361 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 C4orf17Q53FE4 359 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 ZNF648Q5T619 568 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 TIGD7Q6NT04 549 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 SASS6Q6UVJ0 657 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 ASB18Q6ZVZ8 466 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 PHYKPLQ8IUZ5 450 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 AOPEPQ8N6M6 819 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 NIPA2Q8N8Q9 360 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 FATE1Q969F0 183 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 EID2BQ96D98 161 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 TGM7Q96PF1 710 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 OR6C1Q96RD1 312 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms