RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 SNX13Q9Y5W8 968 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 HS3ST4Q9Y661 456 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 LOXHD1Q8IVV2 1947 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 HTTP42858 3142 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 MYO18AQ92614 2054 aaKnown RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 BCLAF3A2AJT9 711 aaKnown RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PRRT4C9JH25 899 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 ARHGAP33O14559 1287 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 ALOX15BO15296 676 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 RNGTTO60942 597 aaKnown RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PAK4O96013 591 aaPredicted RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 ZDHHC11BP0C7U3 371 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 TCF3P15923 654 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 GABRG2P18507 467 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 TFE3P19532 575 aaPredicted RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 MMP8P22894 467 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 MZF1P28698 734 aaPredicted RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 GPR1P46091 355 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 ADARP55265 1226 aaKnown RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 RPS21P63220 83 aaKnown RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PLOD1Q02809 727 aaPredicted RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 ILF3Q12906 894 aaKnown RBP eCLIP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 FOXD4Q12950 439 aaPredicted RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 LBRQ14739 615 aaKnown RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PCSK7Q16549 785 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 ITPRIPL1Q6GPH6 555 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 RAET1GQ6H3X3 334 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 TMEM150AQ86TG1 271 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 ZNF786Q8N393 782 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 LMX1AQ8TE12 382 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 CYGBQ8WWM9 190 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 DCBLD2Q96PD2 775 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 APOL2Q9BQE5 337 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 SLC6A17Q9H1V8 727 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 MARK1Q9P0L2 795 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 SPASTQ9UBP0 616 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 EBF1Q9UH73 591 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 SNX10Q9Y5X0 201 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 A0A1W2PQ67 120 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 TCRBV9S1A1TA0A576 114 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 LRIG2O94898 1065 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 RASGRP1O95267 797 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 THEGLP0DJG4 465 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 RALBP11234 206 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 CCNB1P14635 433 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 VAV1P15498 845 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 TCF4P15884 667 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 CD27P26842 260 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 HOXC13P31276 330 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 HOXD12P35452 270 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 SCNN1AP37088 669 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 SLC1A6P48664 564 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 MMRN1Q13201 1228 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 DPYSL3Q14195 570 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 GALNTL6Q49A17 601 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 KIAA0895LQ68EN5 471 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 SCARA3Q6AZY7 606 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 TCEAL6Q6IPX3 200 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 C22orf39Q6P5X5 142 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 DHDDSQ86SQ9 333 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 SATL1Q86VE3 508 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 TCEAL3Q969E4 200 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 MARK4Q96L34 752 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 CDRT15Q96T59 188 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 ARHGAP9Q9BRR9 750 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 CCDC90BQ9GZT6 254 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PIGVQ9NUD9 493 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 KCTD5Q9NXV2 234 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 NOCTQ9UK39 431 aaKnown RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 GPSM3Q9Y4H4 160 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 LRRC42Q9Y546 428 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 RHPN2P1A8MT19 583 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 CFAP99D6REC4 459 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 PRAMEF26H0Y7S4 382 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 YKT6O15498 198 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 ABHD2P08910 425 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 ZNF806P0C7X5 589 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 GOT1P17174 413 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 HOXD9P28356 352 aaPredicted RBP5.96□□□□□ -1.45
SHQ1-205ENST00000468371 L1CAMP32004 1257 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 NME5P56597 212 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 RACK1P63244 317 aaKnown RBP5.96□□□□□ -1.45
SHQ1-205ENST00000468371 CNPY1Q3B7I2 92 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 RALGPS1Q5JS13 557 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 SH3PXD2AQ5TCZ1 1133 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 NAPEPLDQ6IQ20 393 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 TTC23LQ6PF05 361 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 TMEM92Q6UXU6 159 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 GDPD4Q6W3E5 623 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 BEND5Q7L4P6 421 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 C12orf40Q86WS4 652 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 HPS6Q86YV9 775 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 OR2AP1Q8NGE2 309 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 SEC14L1Q92503 715 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 RAB7BQ96AH8 199 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 ZNF669Q96BR6 464 aaPredicted RBP5.96□□□□□ -1.45
SHQ1-205ENST00000468371 PRR11Q96HE9 360 aaPredicted RBP5.96□□□□□ -1.45
SHQ1-205ENST00000468371 ING2Q9H160 280 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 ACSS3Q9H6R3 686 aa5.96□□□□□ -1.45
SHQ1-205ENST00000468371 IL1RAPL1Q9NZN1 696 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms