RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CEP41Q9BYV8 373 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 SARS2Q9NP81 518 aaKnown RBP20.85■□□□□ 0.93
COL9A3-207ENST00000467819 HEY1Q9Y5J3 304 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 LRRD1A4D1F6 860 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 RAD1O60671 282 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 SLC4A1P02730 911 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 SFTPCP11686 197 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 RAB15P59190 212 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 MESDQ14696 234 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 ZNF648Q5T619 568 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-207ENST00000467819 ALS2CLQ60I27 953 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 IYDQ6PHW0 289 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 KDELC2Q7Z4H8 507 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 SLC9B2Q86UD5 537 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 CNTD1Q8N815 330 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 BMPERQ8N8U9 685 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 CTRCQ99895 268 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 HERPUD2Q9BSE4 406 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 ADGRE3Q9BY15 652 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 RMI1Q9H9A7 625 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 PDP2Q9P2J9 529 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 KLHL3Q9UH77 587 aa20.84■□□□□ 0.93
COL9A3-207ENST00000467819 A6NCN8 305 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 GRID2O43424 1007 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 NUAK1O60285 661 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 PIRTP0C851 137 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 F3P13726 295 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 SLC2A4P14672 509 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 MAN1A1P33908 653 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 IFI35P80217 286 aaPredicted RBP20.83■□□□□ 0.93
COL9A3-207ENST00000467819 PPIDQ08752 370 aaKnown RBP20.83■□□□□ 0.93
COL9A3-207ENST00000467819 AP1B1Q10567 949 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 SLC18A3Q16572 532 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 ZNF569Q5MCW4 686 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 WDR74Q6RFH5 385 aaPredicted RBP20.83■□□□□ 0.93
COL9A3-207ENST00000467819 PLD5Q8N7P1 536 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 SH3KBP1Q96B97 665 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 SPATA16Q9BXB7 569 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 TBC1D10AQ9BXI6 508 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 BRD8Q9H0E9 1235 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 OR2AG1Q9H205 316 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 CARD9Q9H257 536 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 OSGEPL1Q9H4B0 414 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 ATXN10Q9UBB4 475 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 LCMT1Q9UIC8 334 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 SHOC2Q9UQ13 582 aa20.83■□□□□ 0.93
COL9A3-207ENST00000467819 HECTD1Q9ULT8 2610 aa20.83■□□□□ 0.92
COL9A3-207ENST00000467819 RGSL1A5PLK6 1076 aa20.82■□□□□ 0.92
COL9A3-207ENST00000467819 PPFIA2O75334 1257 aa20.82■□□□□ 0.92
COL9A3-207ENST00000467819 ZNF8P17098 575 aaPredicted RBP20.82■□□□□ 0.92
COL9A3-207ENST00000467819 PLA2G4EQ3MJ16 856 aa20.82■□□□□ 0.92
COL9A3-207ENST00000467819 ARHGAP22Q7Z5H3 698 aa20.82■□□□□ 0.92
COL9A3-207ENST00000467819 PHYKPLQ8IUZ5 450 aa20.82■□□□□ 0.92
COL9A3-207ENST00000467819 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.82■□□□□ 0.92
COL9A3-207ENST00000467819 EID2BQ96D98 161 aa20.82■□□□□ 0.92
COL9A3-207ENST00000467819 RTP4Q96DX8 246 aa20.82■□□□□ 0.92
COL9A3-207ENST00000467819 TEFMQ96QE5 360 aaKnown RBP20.82■□□□□ 0.92
COL9A3-207ENST00000467819 DEF6Q9H4E7 631 aa20.82■□□□□ 0.92
COL9A3-207ENST00000467819 ZFYVE1Q9HBF4 777 aa20.82■□□□□ 0.92
COL9A3-207ENST00000467819 PRDM8Q9NQV8 689 aa20.82■□□□□ 0.92
COL9A3-207ENST00000467819 CPNE7Q9UBL6 633 aa20.82■□□□□ 0.92
COL9A3-207ENST00000467819 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.82■□□□□ 0.92
COL9A3-207ENST00000467819 KIR2DS5A0A0G2JLQ3 304 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 A0A0G2JNG1 304 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 KIR2DS3K7RE56 304 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 SLC25A14O95258 325 aaPredicted RBP20.81■□□□□ 0.92
COL9A3-207ENST00000467819 HNRNPH3P31942 346 aaKnown RBP20.81■□□□□ 0.92
COL9A3-207ENST00000467819 EPHA4P54764 986 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 MC2RQ01718 297 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 KIR2DS5Q14953 304 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 PCSK7Q16549 785 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 BORAQ6PGQ7 559 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 CRTC3Q6UUV7 619 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 NPNTQ6UXI9 565 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 ATG14Q6ZNE5 492 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 GPR26Q8NDV2 337 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 AGAP3Q96P47 875 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.81■□□□□ 0.92
COL9A3-207ENST00000467819 XPO4Q9C0E2 1151 aaKnown RBP20.81■□□□□ 0.92
COL9A3-207ENST00000467819 APMAPQ9HDC9 416 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 KLC4Q9NSK0 619 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 GEMIN8Q9NWZ8 242 aaKnown RBP20.81■□□□□ 0.92
COL9A3-207ENST00000467819 PILRAQ9UKJ1 303 aa20.81■□□□□ 0.92
COL9A3-207ENST00000467819 APOL1O14791 398 aa20.8■□□□□ 0.92
COL9A3-207ENST00000467819 TMEM253P0C7T8 217 aa20.8■□□□□ 0.92
COL9A3-207ENST00000467819 CEACAM20Q6UY09 585 aa20.8■□□□□ 0.92
COL9A3-207ENST00000467819 B4GALNT4Q76KP1 1039 aa20.8■□□□□ 0.92
COL9A3-207ENST00000467819 NT5DC3Q86UY8 548 aa20.8■□□□□ 0.92
COL9A3-207ENST00000467819 NLGN4XQ8N0W4 816 aa20.8■□□□□ 0.92
COL9A3-207ENST00000467819 NLGN4YQ8NFZ3 816 aaPredicted RBP20.8■□□□□ 0.92
COL9A3-207ENST00000467819 IMP4Q96G21 291 aaKnown RBP20.8■□□□□ 0.92
COL9A3-207ENST00000467819 TRIB3Q96RU7 358 aa20.8■□□□□ 0.92
COL9A3-207ENST00000467819 ZSCAN5AQ9BUG6 496 aa20.8■□□□□ 0.92
COL9A3-207ENST00000467819 SLC25A18Q9H1K4 315 aa20.8■□□□□ 0.92
COL9A3-207ENST00000467819 ZNF711Q9Y462 761 aa20.8■□□□□ 0.92
COL9A3-207ENST00000467819 UBR5O95071 2799 aaPredicted RBP20.8■□□□□ 0.92
COL9A3-207ENST00000467819 OR5K4A6NMS3 321 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 ZNF891A8MT65 544 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-207ENST00000467819 TERTO14746 1132 aaKnown RBP20.79■□□□□ 0.92
COL9A3-207ENST00000467819 SUV39H1O43463 412 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms