RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 PDXPQ96GD0 296 aa13.97□□□□□ -0.17
CCHCR1-211ENST00000467553 OXNAD1Q96HP4 312 aaPredicted RBP13.97□□□□□ -0.17
CCHCR1-211ENST00000467553 FAM83DQ9H4H8 585 aa13.97□□□□□ -0.17
CCHCR1-211ENST00000467553 CPNE5Q9HCH3 593 aa13.97□□□□□ -0.17
CCHCR1-211ENST00000467553 MAGEE1Q9HCI5 957 aa13.97□□□□□ -0.17
CCHCR1-211ENST00000467553 FGF22Q9HCT0 170 aa13.97□□□□□ -0.17
CCHCR1-211ENST00000467553 TRNAU1APQ9NX07 287 aaKnown RBP13.97□□□□□ -0.17
CCHCR1-211ENST00000467553 PPP2R2CQ9Y2T4 447 aa13.97□□□□□ -0.17
CCHCR1-211ENST00000467553 TMEM98Q9Y2Y6 226 aa13.97□□□□□ -0.17
CCHCR1-211ENST00000467553 COL6A6A6NMZ7 2263 aa13.97□□□□□ -0.17
CCHCR1-211ENST00000467553 LOC285095A0A1B0GVY8 99 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 TCRBV7S2A1N4TA0A589 114 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 INPP4BO15327 924 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 NVLO15381 856 aaKnown RBP13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 ASMTLO95671 621 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 RPLP0P05388 317 aaKnown RBP13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 CEACAM5P06731 702 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 UGT1A5P35504 534 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 POLD2P49005 469 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 GEMP55040 296 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 ZFP36L1Q07352 338 aaKnown RBP13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 MPP3Q13368 585 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 PRPSAP1Q14558 356 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 SIRPB2Q5JXA9 342 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 MEI1Q5TIA1 1274 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 ITPRIPL1Q6GPH6 555 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 CCDC81Q6ZN84 652 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 ZNF662Q6ZS27 426 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 ZNF765Q7L2R6 523 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 NLRP8Q86W28 1048 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 CCDC110Q8TBZ0 833 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 GPBAR1Q8TDU6 330 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 UBE2Q2Q8WVN8 375 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 MRGPRX2Q96LB1 330 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 ALS2CR12Q96Q35 445 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 CCNL2Q96S94 520 aaPredicted RBP13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 GSDMCQ9BYG8 508 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 TMEM168Q9H0V1 697 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 SYNDIG1Q9H7V2 258 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 CARS2Q9HA77 564 aaKnown RBP13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 EPB41L5Q9HCM4 733 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 AKAP7Q9P0M2 348 aaPredicted RBP13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 ATXN7L1Q9ULK2 861 aaPredicted RBP13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 ZNF711Q9Y462 761 aa13.96□□□□□ -0.17
CCHCR1-211ENST00000467553 ARHGEF17Q96PE2 2063 aaPredicted RBP13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 A0A1W2PQM1 296 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 PRSS38A1L453 326 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 NOBOXO60393 691 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 ANXA9O76027 345 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 AGTP01019 485 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 EPOP01588 193 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 FUCA1P04066 466 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 PRB1P04280 392 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 PYGLP06737 847 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 JMJD7P0C870 316 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 CD82P27701 267 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 CHRNA4P43681 627 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 GNPDA1P46926 289 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 CLN3Q13286 438 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 KLF1Q13351 362 aaPredicted RBP13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 HLTFQ14527 1009 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 FOXR1Q6PIV2 292 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 PCSK4Q6UW60 755 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 ADAMTSL4Q6UY14 1074 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 TMC3Q7Z5M5 1100 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 TRIM74Q86UV6 250 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 FAM71DQ8N9W8 422 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 TTC9Q92623 222 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 ANP32BQ92688 251 aaKnown RBP13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 EID2BQ96D98 161 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 WDR24Q96S15 920 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 SRPK1Q96SB4 655 aaKnown RBP13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 CMKLR1Q99788 373 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 FSD1LQ9BXM9 530 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 FRMD8Q9BZ67 464 aaPredicted RBP13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 GBA3Q9H227 469 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 DPEP2Q9H4A9 486 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 BPIFA1Q9NP55 256 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 LRIT1Q9P2V4 623 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 RABGEF1Q9UJ41 708 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 R3HDM2Q9Y2K5 976 aaKnown RBP13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 SPO11Q9Y5K1 396 aa13.95□□□□□ -0.18
CCHCR1-211ENST00000467553 SCN8AQ9UQD0 1980 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 RGSL1A5PLK6 1076 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 AURKAO14965 403 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 SOD1P00441 154 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 PSMB4P28070 264 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 SLC5A2P31639 672 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 GPR3P46089 330 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 ILF3Q12906 894 aaKnown RBP eCLIP13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 NR1D2Q14995 579 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 SLC1A5Q15758 541 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 ALS2CLQ60I27 953 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 MARK2Q7KZI7 788 aaKnown RBP13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 SPRED1Q7Z699 444 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 C17orf82Q86X59 251 aaPredicted RBP13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 SLC13A5Q86YT5 568 aaPredicted RBP13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 GPR26Q8NDV2 337 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 CCL4L1Q8NHW4 92 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 PTCD2Q8WV60 388 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms