RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 HP1BP3Q5SSJ5 553 aaPredicted RBP15.06■□□□□ 0
NPHP4-205ENST00000466897 MRNIPQ6NTE8 343 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 SLC23A3Q6PIS1 610 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 PTAR1Q7Z6K3 402 aaPredicted RBP15.06■□□□□ 0
NPHP4-205ENST00000466897 CNTN4Q8IWV2 1026 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 PALM2Q8IXS6 379 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 SLC22A18ASQ8N1D0 253 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 OR13H1Q8NG92 308 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 OR6P1Q8NGX9 317 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 PIGKQ92643 395 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 CERS2Q96G23 380 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 TCF12Q99081 682 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 TTC1Q99614 292 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 FAM167BQ9BTA0 163 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 FUT8Q9BYC5 575 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 TXLNGYQ9BZA5 131 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 ZCCHC2Q9C0B9 1178 aaKnown RBP15.06■□□□□ 0
NPHP4-205ENST00000466897 ERVMER34-1Q9H9K5 563 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 CATSPERZQ9NTU4 200 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 MOCS1Q9NZB8 636 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 CRLS1Q9UJA2 301 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 TMPRSS11EQ9UL52 423 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 CA5BQ9Y2D0 317 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 FNDC3AQ9Y2H6 1198 aaKnown RBP15.06■□□□□ 0
NPHP4-205ENST00000466897 OR1A2Q9Y585 309 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 ATXN2Q99700 1313 aaKnown RBP15.06■□□□□ 0
NPHP4-205ENST00000466897 SPTY2D1-AS1A0A0U1RR47 76 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 TLR4O00206 839 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 CD3EAPO15446 510 aaKnown RBP15.05■□□□□ -0
NPHP4-205ENST00000466897 CTIFO43310 598 aaKnown RBP15.05■□□□□ -0
NPHP4-205ENST00000466897 VEGFDO43915 354 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 LRP3O75074 770 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 SLC25A14O95258 325 aaPredicted RBP15.05■□□□□ -0
NPHP4-205ENST00000466897 TTPAP49638 278 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 THOP1P52888 689 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 NXPH1P58417 271 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 TYSND1Q2T9J0 566 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 ZRANB3Q5FWF4 1079 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 GPRC6AQ5T6X5 926 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 RNF187Q5TA31 235 aaPredicted RBP15.05■□□□□ -0
NPHP4-205ENST00000466897 PSAPL1Q6NUJ1 521 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 NEPROQ6NW34 567 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 PACS1Q6VY07 963 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 TRMT10CQ7L0Y3 403 aaKnown RBP15.05■□□□□ -0
NPHP4-205ENST00000466897 GALNT7Q86SF2 657 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 KCNMB4Q86W47 210 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 PIANPQ8IYJ0 282 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 CFAP36Q96G28 342 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 SCARF2Q96GP6 870 aaPredicted RBP15.05■□□□□ -0
NPHP4-205ENST00000466897 C9orf72Q96LT7 481 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 WDR92Q96MX6 357 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 LGR4Q9BXB1 951 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 PARD6BQ9BYG5 372 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 ZDHHC5Q9C0B5 715 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 CDC42EP4Q9H3Q1 356 aaKnown RBP15.05■□□□□ -0
NPHP4-205ENST00000466897 RMI1Q9H9A7 625 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 CAPN10Q9HC96 672 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 LRRC4CQ9HCJ2 640 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 TRIM39Q9HCM9 518 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 C20orf96Q9NUD7 363 aaPredicted RBP15.05■□□□□ -0
NPHP4-205ENST00000466897 SLC17A4Q9Y2C5 497 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 SDK1Q7Z5N4 2213 aa15.05■□□□□ -0
NPHP4-205ENST00000466897 MYO15AQ9UKN7 3530 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 OR51F1A6NGY5 319 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 PFDN6O15212 129 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 INPP4BO15327 924 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 GPR39O43194 453 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 UGT1A9O60656 530 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 LMNAP02545 664 aaKnown RBP15.04■□□□□ -0
NPHP4-205ENST00000466897 FAM153BP0C7A2 387 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 UGT1A6P19224 532 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 UGT1A1P22309 533 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 UGT1A4P22310 534 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 SSTR1P30872 391 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 STX2P32856 288 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 UGT1A3P35503 534 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 UGT1A5P35504 534 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 GPX6P59796 221 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 THOC5Q13769 683 aaKnown RBP15.04■□□□□ -0
NPHP4-205ENST00000466897 PDE1CQ14123 709 aaPredicted RBP15.04■□□□□ -0
NPHP4-205ENST00000466897 LPAL2Q16609 132 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 FAM153CQ494X1 144 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 EMBQ6PCB8 327 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 KIAA0408Q6ZU52 694 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 C3orf62Q6ZUJ4 267 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 PARGQ86W56 976 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 SERPINA9Q86WD7 417 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 CILP2Q8IUL8 1156 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 OXR1Q8N573 874 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 COPS8Q99627 209 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 UGT1A7Q9HAW7 530 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 UGT1A10Q9HAW8 530 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 UGT1A8Q9HAW9 530 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 INTS10Q9NVR2 710 aaKnown RBP15.04■□□□□ -0
NPHP4-205ENST00000466897 ZDHHC3Q9NYG2 299 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 NINJ2Q9NZG7 142 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 GMEB2Q9UKD1 530 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 VPS9D1Q9Y2B5 631 aa15.04■□□□□ -0
NPHP4-205ENST00000466897 TCRBV9S1A1TA0A576 114 aa15.03■□□□□ -0
NPHP4-205ENST00000466897 CFAP99D6REC4 459 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms