RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 SSR1P43307 286 aaKnown RBP22.37■■□□□ 1.17
USP4-208ENST00000464168 MAPK9P45984 424 aa22.37■■□□□ 1.17
USP4-208ENST00000464168 ABHD18Q0P651 414 aa22.37■■□□□ 1.17
USP4-208ENST00000464168 CDC20Q12834 499 aa22.37■■□□□ 1.17
USP4-208ENST00000464168 KIR2DS5Q14953 304 aa22.37■■□□□ 1.17
USP4-208ENST00000464168 QPCTQ16769 361 aa22.37■■□□□ 1.17
USP4-208ENST00000464168 TDRD12Q587J7 1177 aaKnown RBP22.37■■□□□ 1.17
USP4-208ENST00000464168 ANKRD20A8PQ5CZ79 823 aa22.37■■□□□ 1.17
USP4-208ENST00000464168 EFHD1Q9BUP0 239 aa22.37■■□□□ 1.17
USP4-208ENST00000464168 TBC1D10AQ9BXI6 508 aa22.37■■□□□ 1.17
USP4-208ENST00000464168 KLHL3Q9UH77 587 aa22.37■■□□□ 1.17
USP4-208ENST00000464168 BZW2Q9Y6E2 419 aaKnown RBP22.37■■□□□ 1.17
USP4-208ENST00000464168 USP9YO00507 2555 aaPredicted RBP22.36■■□□□ 1.17
USP4-208ENST00000464168 OAS2P29728 719 aaKnown RBP22.36■■□□□ 1.17
USP4-208ENST00000464168 CASRP41180 1078 aa22.36■■□□□ 1.17
USP4-208ENST00000464168 HADHQ16836 314 aaKnown RBP22.36■■□□□ 1.17
USP4-208ENST00000464168 CPNE8Q86YQ8 564 aa22.36■■□□□ 1.17
USP4-208ENST00000464168 SYN2Q92777 582 aaPredicted RBP22.36■■□□□ 1.17
USP4-208ENST00000464168 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.36■■□□□ 1.17
USP4-208ENST00000464168 TRIT1Q9H3H1 467 aaKnown RBP22.36■■□□□ 1.17
USP4-208ENST00000464168 EPB41L1Q9H4G0 881 aa22.36■■□□□ 1.17
USP4-208ENST00000464168 PRDM8Q9NQV8 689 aa22.36■■□□□ 1.17
USP4-208ENST00000464168 ZNF71Q9NQZ8 489 aaPredicted RBP22.36■■□□□ 1.17
USP4-208ENST00000464168 HAUS2Q9NVX0 235 aa22.36■■□□□ 1.17
USP4-208ENST00000464168 TMEM63CQ9P1W3 806 aa22.36■■□□□ 1.17
USP4-208ENST00000464168 ATXN10Q9UBB4 475 aa22.36■■□□□ 1.17
USP4-208ENST00000464168 A0A087X0T9 212 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 RGSL1A5PLK6 1076 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 OR5K4A6NMS3 321 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 ANKRD66B4E2M5 251 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 GOLGA6L22H0YM25 854 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 POLR1CO15160 346 aaPredicted RBP22.35■■□□□ 1.17
USP4-208ENST00000464168 GRID2O43424 1007 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 NUAK1O60285 661 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 DLGAP3O95886 979 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 MBD3O95983 291 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 MMP2P08253 660 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 FAM228BP0C875 321 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 SLC2A4P14672 509 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 GBE1Q04446 702 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 SLC10A2Q12908 348 aaPredicted RBP22.35■■□□□ 1.17
USP4-208ENST00000464168 KDELC2Q7Z4H8 507 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 PQLC3Q8N755 202 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 KCTD6Q8NC69 237 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 C9orf43Q8TAL5 461 aaPredicted RBP22.35■■□□□ 1.17
USP4-208ENST00000464168 CCHCR1Q8TD31 782 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 EID2BQ96D98 161 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 ZNF670Q9BS34 389 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 MLPHQ9BV36 600 aaPredicted RBP22.35■■□□□ 1.17
USP4-208ENST00000464168 CARD9Q9H257 536 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 SIDT1Q9NXL6 827 aaKnown RBP22.35■■□□□ 1.17
USP4-208ENST00000464168 PKD2L2Q9NZM6 624 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 ANAPC2Q9UJX6 822 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 ADGRG1Q9Y653 693 aa22.35■■□□□ 1.17
USP4-208ENST00000464168 USP9XQ93008 2570 aaPredicted RBP22.34■■□□□ 1.17
USP4-208ENST00000464168 ZNF8P17098 575 aaPredicted RBP22.34■■□□□ 1.17
USP4-208ENST00000464168 CLCNKAP51800 687 aa22.34■■□□□ 1.17
USP4-208ENST00000464168 UBE2IP63279 158 aaKnown RBP22.34■■□□□ 1.17
USP4-208ENST00000464168 FOXK1P85037 733 aa22.34■■□□□ 1.17
USP4-208ENST00000464168 IGFBP7Q16270 282 aa22.34■■□□□ 1.17
USP4-208ENST00000464168 DEFB109BQ30KR1 87 aa22.34■■□□□ 1.17
USP4-208ENST00000464168 PLXDC1Q8IUK5 500 aa22.34■■□□□ 1.17
USP4-208ENST00000464168 APOBEC4Q8WW27 367 aaKnown RBP22.34■■□□□ 1.17
USP4-208ENST00000464168 STARD8Q92502 1023 aa22.34■■□□□ 1.17
USP4-208ENST00000464168 PLEKHG4BQ96PX9 1271 aa22.34■■□□□ 1.17
USP4-208ENST00000464168 OR2AG1Q9H205 316 aa22.34■■□□□ 1.17
USP4-208ENST00000464168 ARFGAP3Q9NP61 516 aa22.34■■□□□ 1.17
USP4-208ENST00000464168 MN1Q10571 1320 aaPredicted RBP22.33■■□□□ 1.17
USP4-208ENST00000464168 A0A1W2PQJ5 194 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 LILRA5A6NI73 299 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 JCHAINP01591 159 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 SERPING1P05155 500 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 ANKRD34CP0C6C1 535 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 GJC1P36383 396 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 CD86P42081 329 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 STAT5AP42229 794 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 PDK2Q15119 407 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 CRTC2Q53ET0 693 aaPredicted RBP22.33■■□□□ 1.17
USP4-208ENST00000464168 ZNF648Q5T619 568 aaPredicted RBP22.33■■□□□ 1.17
USP4-208ENST00000464168 ATP1A1-AS1Q5TC04 95 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 PHYKPLQ8IUZ5 450 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 FAF2Q96CS3 445 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 ABHD17AQ96GS6 310 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 UCK1Q9HA47 277 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 KLC4Q9NSK0 619 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 OGFRQ9NZT2 677 aa22.33■■□□□ 1.17
USP4-208ENST00000464168 SCHIP1Q9P0W5 487 aaPredicted RBP22.33■■□□□ 1.17
USP4-208ENST00000464168 SERPINC1P01008 464 aa22.32■■□□□ 1.16
USP4-208ENST00000464168 C9P02748 559 aa22.32■■□□□ 1.16
USP4-208ENST00000464168 MX2P20592 715 aa22.32■■□□□ 1.16
USP4-208ENST00000464168 F8A1P23610 371 aa22.32■■□□□ 1.16
USP4-208ENST00000464168 GFERP55789 205 aa22.32■■□□□ 1.16
USP4-208ENST00000464168 TAS2R40P59535 323 aa22.32■■□□□ 1.16
USP4-208ENST00000464168 MC1RQ01726 317 aa22.32■■□□□ 1.16
USP4-208ENST00000464168 MAP7Q14244 749 aa22.32■■□□□ 1.16
USP4-208ENST00000464168 NFKBIBQ15653 356 aa22.32■■□□□ 1.16
USP4-208ENST00000464168 ALKBH5Q6P6C2 394 aaKnown RBP22.32■■□□□ 1.16
USP4-208ENST00000464168 CCDC13Q8IYE1 715 aa22.32■■□□□ 1.16
USP4-208ENST00000464168 CNTD1Q8N815 330 aa22.32■■□□□ 1.16
USP4-208ENST00000464168 AVL9Q8NBF6 648 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms