RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 MT-ND3P03897 115 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 PDHA1P08559 390 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 ZNF30P17039 623 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 TYRP1P17643 537 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 AMD1P17707 334 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 MIPP30301 263 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 GARSP41250 739 aaKnown RBP13.14□□□□□ -0.31
MRPL55-224ENST00000464148 MMP13P45452 471 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 PGDP52209 483 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 SH3BP2P78314 561 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 MAMLD1Q13495 774 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 SEMA5AQ13591 1074 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 DNASE1L3Q13609 305 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 DPYSQ14117 519 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 ACAD10Q6JQN1 1059 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 TMCO3Q6UWJ1 677 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 PHYKPLQ8IUZ5 450 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 ATPAF2Q8N5M1 289 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 NEK11Q8NG66 645 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 CASS4Q9NQ75 786 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 RCOR3Q9P2K3 495 aaPredicted RBP13.14□□□□□ -0.31
MRPL55-224ENST00000464148 PCDHGA6Q9Y5G7 932 aa13.14□□□□□ -0.31
MRPL55-224ENST00000464148 ZNF106Q9H2Y7 1883 aaKnown RBP13.13□□□□□ -0.31
MRPL55-224ENST00000464148 A0A0J9YYE9 177 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 A6NCN8 305 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 LILRA5A6NI73 299 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 TMCO5BA8MYB1 307 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 TOX3O15405 576 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-224ENST00000464148 MAFKO60675 156 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 SPAG6O75602 509 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 UBXN7O94888 489 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 RECKO95980 971 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 TRBC1P01850 177 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 C9P02748 559 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 RNF224P0DH78 156 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 ARL4AP40617 200 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 STC1P52823 247 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 CDH6P55285 790 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 KRT31Q15323 416 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 NADK2Q4G0N4 442 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 PSTKQ8IV42 348 aaKnown RBP13.13□□□□□ -0.31
MRPL55-224ENST00000464148 TRIM48Q8IWZ4 208 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.13□□□□□ -0.31
MRPL55-224ENST00000464148 ARFGAP1Q8N6T3 406 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 CT55Q8WUE5 264 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 PLEKHG4BQ96PX9 1271 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 SLC25A23Q9BV35 468 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 TRIM55Q9BYV6 548 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 OSGEPL1Q9H4B0 414 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 ACTL8Q9H568 366 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 RMI1Q9H9A7 625 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 NT5MQ9NPB1 228 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 MAP10Q9P2G4 905 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 SIK3Q9Y2K2 1263 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 MAP4K5Q9Y4K4 846 aa13.13□□□□□ -0.31
MRPL55-224ENST00000464148 TNRC6AQ8NDV7 1962 aaKnown RBP13.12□□□□□ -0.31
MRPL55-224ENST00000464148 TEP1Q99973 2627 aaKnown RBP13.12□□□□□ -0.31
MRPL55-224ENST00000464148 RP1L1Q8IWN7 2480 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-224ENST00000464148 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-224ENST00000464148 GRID2O43424 1007 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 CLDN7O95471 211 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 DDAH2O95865 285 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 VIPP01282 170 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 AMPD1P23109 780 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 LEPRP48357 1165 aaKnown RBP13.12□□□□□ -0.31
MRPL55-224ENST00000464148 ZNF787Q6DD87 383 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 CYB5D1Q6P9G0 228 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 PPP1R3BQ86XI6 285 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 SEC14L1Q92503 715 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 ZNF768Q9H5H4 540 aaKnown RBP13.12□□□□□ -0.31
MRPL55-224ENST00000464148 UCK1Q9HA47 277 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 GRPEL1Q9HAV7 217 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 LHX9Q9NQ69 397 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 KLC4Q9NSK0 619 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 ETNK2Q9NVF9 386 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 OGFRQ9NZT2 677 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 DNPEPQ9ULA0 475 aa13.12□□□□□ -0.31
MRPL55-224ENST00000464148 CNOT6Q9ULM6 557 aaKnown RBP13.12□□□□□ -0.31
MRPL55-224ENST00000464148 TMEM191CA6NGB0 347 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 C21orf140B9A014 251 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 FZD6O60353 706 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 CCDC172P0C7W6 258 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 FGF5P12034 268 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 XRCC1P18887 633 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-224ENST00000464148 COL8A1P27658 744 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 DEKP35659 375 aaKnown RBP13.11□□□□□ -0.31
MRPL55-224ENST00000464148 CCL11P51671 97 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 UBE2IP63279 158 aaKnown RBP13.11□□□□□ -0.31
MRPL55-224ENST00000464148 TYRO3Q06418 890 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 EIF2S3LQ2VIR3 472 aaKnown RBP13.11□□□□□ -0.31
MRPL55-224ENST00000464148 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
MRPL55-224ENST00000464148 CACHD1Q5VU97 1274 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 PPP1R2P3Q6NXS1 205 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 SASS6Q6UVJ0 657 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 TMEM26Q6ZUK4 368 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 CYP4V2Q6ZWL3 525 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-224ENST00000464148 MAMDC2Q7Z304 686 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-224ENST00000464148 PRR7Q8TB68 274 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 THAP4Q8WY91 577 aa13.11□□□□□ -0.31
MRPL55-224ENST00000464148 TRIM7Q9C029 511 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms