RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 HYAL3O43820 417 aaPredicted RBP17.51■□□□□ 0.39
VPS52-214ENST00000463486 NUAK1O60285 661 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 NOBOXO60393 691 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 SLC25A14O95258 325 aaPredicted RBP17.51■□□□□ 0.39
VPS52-214ENST00000463486 ZNF8P17098 575 aaPredicted RBP17.51■□□□□ 0.39
VPS52-214ENST00000463486 AK4P27144 223 aaPredicted RBP17.51■□□□□ 0.39
VPS52-214ENST00000463486 FOXC1Q12948 553 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 ILKQ13418 452 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 CERCAMQ5T4B2 595 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 FAM151BQ6UXP7 276 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 C4orf22Q6V702 233 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 MARK2Q7KZI7 788 aaKnown RBP17.51■□□□□ 0.39
VPS52-214ENST00000463486 LINC00523Q86TU6 105 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 GKN2Q86XP6 184 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 GPR156Q8NFN8 814 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 NAP1L3Q99457 506 aaPredicted RBP17.51■□□□□ 0.39
VPS52-214ENST00000463486 OR2AG1Q9H205 316 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 ZNF106Q9H2Y7 1883 aaKnown RBP17.51■□□□□ 0.39
VPS52-214ENST00000463486 EIF2B3Q9NR50 452 aaKnown RBP17.51■□□□□ 0.39
VPS52-214ENST00000463486 FKBPLQ9UIM3 349 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 PKP3Q9Y446 797 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 PRKAB1Q9Y478 270 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.5■□□□□ 0.39
VPS52-214ENST00000463486 TCRBV7S3A2A0A539 114 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 PRR19A6NJB7 356 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 MTX2O75431 263 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 RFPL3O75679 317 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 ASMTLO95671 621 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 CRTAMO95727 393 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 APRTP07741 180 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 SPINK2P20155 84 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 ACTN2P35609 894 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 MAGEA6P43360 314 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 CDH17Q12864 832 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 POU6F1Q14863 301 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 TRIP13Q15645 432 aaPredicted RBP17.5■□□□□ 0.39
VPS52-214ENST00000463486 SMAD1Q15797 465 aaKnown RBP17.5■□□□□ 0.39
VPS52-214ENST00000463486 CCDC137Q6PK04 289 aaKnown RBP17.5■□□□□ 0.39
VPS52-214ENST00000463486 DHRS13Q6UX07 377 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 ZNF534Q76KX8 674 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 GSTA5Q7RTV2 222 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 TAF8Q7Z7C8 310 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 ZNF547Q8IVP9 402 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 KYQ8NBH2 561 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 OR2M4Q96R27 311 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 NAPGQ99747 312 aaPredicted RBP17.5■□□□□ 0.39
VPS52-214ENST00000463486 SCNM1Q9BWG6 230 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 SUDS3Q9H7L9 328 aaPredicted RBP17.5■□□□□ 0.39
VPS52-214ENST00000463486 RMI1Q9H9A7 625 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 SMOXQ9NWM0 555 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 GPR34Q9UPC5 381 aa17.5■□□□□ 0.39
VPS52-214ENST00000463486 PTPRBP23467 1997 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 RP1P56715 2156 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 CCL22O00626 93 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 CASC3O15234 703 aaKnown RBP17.49■□□□□ 0.39
VPS52-214ENST00000463486 PHF2O75151 1096 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 SRP72O76094 671 aaKnown RBP17.49■□□□□ 0.39
VPS52-214ENST00000463486 PDE1BQ01064 536 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 GUSBP11Q6P575 273 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 TMPRSS7Q7RTY8 843 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 PHYKPLQ8IUZ5 450 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 ARL10Q8N8L6 244 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 FAM46DQ8NEK8 389 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 DDHD1Q8NEL9 900 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 ZNF398Q8TD17 642 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 SCG3Q8WXD2 468 aaKnown RBP17.49■□□□□ 0.39
VPS52-214ENST00000463486 LRRC45Q96CN5 670 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 DNAJC1Q96KC8 554 aaKnown RBP17.49■□□□□ 0.39
VPS52-214ENST00000463486 GSDMCQ9BYG8 508 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 NLE1Q9NVX2 485 aaPredicted RBP17.49■□□□□ 0.39
VPS52-214ENST00000463486 NCKIPSDQ9NZQ3 722 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 TAAR2Q9P1P5 351 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 SLC23A2Q9UGH3 650 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 KLK13Q9UKR3 277 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 GPSM3Q9Y4H4 160 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 SAR1BQ9Y6B6 198 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 IGF2RP11717 2491 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 PLXNB3Q9ULL4 1909 aa17.49■□□□□ 0.39
VPS52-214ENST00000463486 CTAGE9A4FU28 777 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 GPR89AB7ZAQ6 455 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 H7C0S8 307 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 GRID2O43424 1007 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 VEGFDO43915 354 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 PRAMEF1O95521 474 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 EML2O95834 649 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 KRT14P02533 472 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 GP1BAP07359 652 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 GPR89BP0CG08 455 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 FNTAP49354 379 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 ARSDP51689 593 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 CLDN6P56747 220 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 DAB2P98082 770 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 TMEM115Q12893 351 aaPredicted RBP17.48■□□□□ 0.39
VPS52-214ENST00000463486 ILF3Q12906 894 aaKnown RBP eCLIP17.48■□□□□ 0.39
VPS52-214ENST00000463486 LRP8Q14114 963 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 KCNJ11Q14654 390 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 NR0B2Q15466 257 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 CCDC38Q502W7 563 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 HS1BP3Q53T59 392 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 PERM1Q5SV97 790 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms