RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 CD97P48960 835 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 DSC2Q02487 901 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 HENMT1Q5T8I9 393 aaKnown RBP20.51■□□□□ 0.87
CPSF7-209ENST00000463244 E4F1Q66K89 784 aaPredicted RBP20.51■□□□□ 0.87
CPSF7-209ENST00000463244 PLXDC1Q8IUK5 500 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 PSMG3-AS1Q96PY0 264 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 AIPL1Q9NZN9 384 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 TP53TG5Q9Y2B4 290 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 CENPEQ02224 2701 aa20.5■□□□□ 0.87
CPSF7-209ENST00000463244 OR5K4A6NMS3 321 aa20.5■□□□□ 0.87
CPSF7-209ENST00000463244 C9P02748 559 aa20.5■□□□□ 0.87
CPSF7-209ENST00000463244 IL4RP24394 825 aa20.5■□□□□ 0.87
CPSF7-209ENST00000463244 GARSP41250 739 aaKnown RBP20.5■□□□□ 0.87
CPSF7-209ENST00000463244 SPINT3P49223 89 aa20.5■□□□□ 0.87
CPSF7-209ENST00000463244 GFERP55789 205 aa20.5■□□□□ 0.87
CPSF7-209ENST00000463244 SLC25A11Q02978 314 aaKnown RBP20.5■□□□□ 0.87
CPSF7-209ENST00000463244 STX1AQ16623 288 aa20.5■□□□□ 0.87
CPSF7-209ENST00000463244 SASS6Q6UVJ0 657 aa20.5■□□□□ 0.87
CPSF7-209ENST00000463244 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.5■□□□□ 0.87
CPSF7-209ENST00000463244 AVL9Q8NBF6 648 aa20.5■□□□□ 0.87
CPSF7-209ENST00000463244 MAML1Q92585 1016 aa20.5■□□□□ 0.87
CPSF7-209ENST00000463244 ULBP3Q9BZM4 244 aa20.5■□□□□ 0.87
CPSF7-209ENST00000463244 MFSD11O43934 449 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 NUAK1O60285 661 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 ZNF28P17035 718 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 NR1D1P20393 614 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 DLSTP36957 453 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 RPL26P61254 145 aaKnown RBP20.49■□□□□ 0.87
CPSF7-209ENST00000463244 UBE2IP63279 158 aaKnown RBP20.49■□□□□ 0.87
CPSF7-209ENST00000463244 FOXM1Q08050 763 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 PIGHQ14442 188 aaPredicted RBP20.49■□□□□ 0.87
CPSF7-209ENST00000463244 PHYKPLQ8IUZ5 450 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 ARRDC2Q8TBH0 407 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 C9orf72Q96LT7 481 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 ISCUQ9H1K1 167 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 CARD9Q9H257 536 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 UCK1Q9HA47 277 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 PRDM8Q9NQV8 689 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 OGFRQ9NZT2 677 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 RCOR3Q9P2K3 495 aaPredicted RBP20.49■□□□□ 0.87
CPSF7-209ENST00000463244 AMACRQ9UHK6 382 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 RPL26L1Q9UNX3 145 aaKnown RBP20.49■□□□□ 0.87
CPSF7-209ENST00000463244 PCDHB3Q9Y5E6 796 aa20.49■□□□□ 0.87
CPSF7-209ENST00000463244 C1orf232A0A0U1RR37 186 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 K7EM74 188 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 MATN3O15232 486 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 MTSS1O43312 755 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 GRID2O43424 1007 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 CA4P22748 312 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 ZNF165P49910 485 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 CLCNKAP51800 687 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 GALNT2Q10471 571 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 MMRN1Q13201 1228 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 KRT81Q14533 505 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 TCTN3Q6NUS6 607 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 C6orf15Q6UXA7 325 aaPredicted RBP20.48■□□□□ 0.87
CPSF7-209ENST00000463244 NIPA2Q8N8Q9 360 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 LPCAT1Q8NF37 534 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 FAM71BQ8TC56 605 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 PLEKHG4BQ96PX9 1271 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 FAM83DQ9H4H8 585 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 PCDH9Q9HC56 1237 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 RBM22Q9NW64 420 aaKnown RBP eCLIP20.48■□□□□ 0.871e-6■■■■□ 23.9
CPSF7-209ENST00000463244 PKD2L2Q9NZM6 624 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 ATXN10Q9UBB4 475 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 CROTQ9UKG9 612 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 TTLL3Q9Y4R7 772 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 ADGRG1Q9Y653 693 aa20.48■□□□□ 0.87
CPSF7-209ENST00000463244 ITPR2Q14571 2701 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 RGSL1A5PLK6 1076 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 MKRN2OSH3BPM6 223 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 CD48P09326 243 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 FURINP09958 794 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 NIPAL4Q0D2K0 466 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 KLHL30Q0D2K2 578 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 TIGD7Q6NT04 549 aaPredicted RBP20.47■□□□□ 0.87
CPSF7-209ENST00000463244 ATCAYQ86WG3 371 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 CCDC13Q8IYE1 715 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 AOPEPQ8N6M6 819 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 GALNT6Q8NCL4 622 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 FATE1Q969F0 183 aa20.47■□□□□ 0.87
CPSF7-209ENST00000463244 RTN4Q9NQC3 1192 aaKnown RBP20.47■□□□□ 0.87
CPSF7-209ENST00000463244 TOX3O15405 576 aaPredicted RBP20.46■□□□□ 0.87
CPSF7-209ENST00000463244 UBXN7O94888 489 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 ZNF8P17098 575 aaPredicted RBP20.46■□□□□ 0.87
CPSF7-209ENST00000463244 XRCC1P18887 633 aaPredicted RBP20.46■□□□□ 0.87
CPSF7-209ENST00000463244 MLLT10P55197 1068 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 SH3BP2P78314 561 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 ERV3-1Q14264 604 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 PAFAH1B3Q15102 231 aaKnown RBP20.46■□□□□ 0.87
CPSF7-209ENST00000463244 IFI16Q16666 785 aaKnown RBP20.46■□□□□ 0.87
CPSF7-209ENST00000463244 ANKRD20A8PQ5CZ79 823 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 NCBP2-AS2Q69YL0 99 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 CLEC17AQ6ZS10 378 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 TMEM26Q6ZUK4 368 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 TEX19Q8NA77 164 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 RNF31Q96EP0 1072 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 BTBD6Q96KE9 485 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 TSGA13Q96PP4 275 aa20.46■□□□□ 0.87
CPSF7-209ENST00000463244 KLC4Q9NSK0 619 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms