RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ACTR1BP42025 376 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 MAZP56270 477 aaKnown RBP15.25■□□□□ 0.03
VARS-219ENST00000461328 PCBP4P57723 403 aaKnown RBP15.25■□□□□ 0.03
VARS-219ENST00000461328 ACTR1AP61163 376 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 CTBSQ01459 385 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 KLF1Q13351 362 aaPredicted RBP15.25■□□□□ 0.03
VARS-219ENST00000461328 HLTFQ14527 1009 aaKnown RBP eCLIP15.25■□□□□ 0.03
VARS-219ENST00000461328 PDZD3Q86UT5 571 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 PHYKPLQ8IUZ5 450 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 TRAM1L1Q8N609 369 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 UBE2Q2Q8WVN8 375 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 APOL2Q9BQE5 337 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 EPB41L5Q9HCM4 733 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 ARFGAP3Q9NP61 516 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 THSD1Q9NS62 852 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 VPS18Q9P253 973 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 ZNHIT2Q9UHR6 403 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 APPL1Q9UKG1 709 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 PKP3Q9Y446 797 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 OAS3Q9Y6K5 1087 aaKnown RBP15.25■□□□□ 0.03
VARS-219ENST00000461328 RP1P56715 2156 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 FAM208BQ5VWN6 2430 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 CCDC187A0A096LP49 1063 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 A0A1W2PQM1 296 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 TMX2-CTNND1H3BSU7 103 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 SLC25A14O95258 325 aaPredicted RBP15.24■□□□□ 0.03
VARS-219ENST00000461328 AGTP01019 485 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 BPIP17213 487 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 ITPKBP27987 946 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 PDX1P52945 283 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 INHBCP55103 352 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 ERVPABLB-1P60509 514 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 CCDC173Q0VFZ6 552 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 MEI1Q5TIA1 1274 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 PDPK2PQ6A1A2 396 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 SPRED1Q7Z699 444 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 ZNF248Q8NDW4 579 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 TRIM58Q8NG06 486 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 WDR36Q8NI36 951 aaKnown RBP15.24■□□□□ 0.03
VARS-219ENST00000461328 GDAP1Q8TB36 358 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 ATG4AQ8WYN0 398 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 ANP32BQ92688 251 aaKnown RBP15.24■□□□□ 0.03
VARS-219ENST00000461328 SCARF2Q96GP6 870 aaPredicted RBP15.24■□□□□ 0.03
VARS-219ENST00000461328 GORASP1Q9BQQ3 440 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 TMEM121Q9BTD3 319 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 FOXP3Q9BZS1 431 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 STRADBQ9C0K7 418 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 NFKBIL1Q9UBC1 381 aaPredicted RBP15.24■□□□□ 0.03
VARS-219ENST00000461328 PPP2R2CQ9Y2T4 447 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 PRKAB1Q9Y478 270 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 PLEKHM1Q9Y4G2 1056 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 PCDHGA8Q9Y5G5 932 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 ZFHX4Q86UP3 3567 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 ITPR1Q14643 2758 aa15.24■□□□□ 0.03
VARS-219ENST00000461328 A0A1W2PNU3 283 aaPredicted RBP15.23■□□□□ 0.03
VARS-219ENST00000461328 RHPN2P1A8MT19 583 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 BUD23O43709 281 aaKnown RBP15.23■□□□□ 0.03
VARS-219ENST00000461328 ECEL1O95672 775 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 ACP5P13686 325 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 HMGCLP35914 325 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 SPAM1P38567 509 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 LRP8Q14114 963 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 P3H1Q32P28 736 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 PYCR3Q53H96 274 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 ZDHHC20Q5W0Z9 365 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 ZNF662Q6ZS27 426 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 CHST15Q7LFX5 561 aaPredicted RBP15.23■□□□□ 0.03
VARS-219ENST00000461328 B3GNT8Q7Z7M8 397 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 SLC13A5Q86YT5 568 aaPredicted RBP15.23■□□□□ 0.03
VARS-219ENST00000461328 ARL14Q8N4G2 192 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 TTC30BQ8N4P2 665 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 GLYATL1Q969I3 302 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 CRELD1Q96HD1 420 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 NAF1Q96HR8 494 aaKnown RBP15.23■□□□□ 0.03
VARS-219ENST00000461328 TMEM74Q96NL1 305 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 PLEKHG4BQ96PX9 1271 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 TBL1YQ9BQ87 522 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 OR2AG1Q9H205 316 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 CARD9Q9H257 536 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 RMI1Q9H9A7 625 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 ASCL3Q9NQ33 180 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 ATXN7L1Q9ULK2 861 aaPredicted RBP15.23■□□□□ 0.03
VARS-219ENST00000461328 CNOT6Q9ULM6 557 aaKnown RBP15.23■□□□□ 0.03
VARS-219ENST00000461328 ST14Q9Y5Y6 855 aa15.23■□□□□ 0.03
VARS-219ENST00000461328 PMS2P1A4D2B8 440 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 C5orf60A6NFR6 353 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 STX7O15400 261 aaKnown RBP15.22■□□□□ 0.03
VARS-219ENST00000461328 ZW10O43264 779 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 TNFSF15O95150 251 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 IFNB1P01574 187 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 OLIG2Q13516 323 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 SPARCL1Q14515 664 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 MAP9Q49MG5 647 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 ZNF648Q5T619 568 aaPredicted RBP15.22■□□□□ 0.03
VARS-219ENST00000461328 IGF2-ASQ6U949 168 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 CRTC3Q6UUV7 619 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 FAM151BQ6UXP7 276 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 C17orf82Q86X59 251 aaPredicted RBP15.22■□□□□ 0.03
VARS-219ENST00000461328 SPACA3Q8IXA5 215 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 TAB3Q8N5C8 712 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms