RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 ETNK2Q9NVF9 386 aa14.39□□□□□ -0.11
DNMT3A-207ENST00000461228 PKD2L2Q9NZM6 624 aa14.39□□□□□ -0.11
DNMT3A-207ENST00000461228 SEMA5BQ9P283 1151 aa14.39□□□□□ -0.11
DNMT3A-207ENST00000461228 CPNE7Q9UBL6 633 aa14.39□□□□□ -0.11
DNMT3A-207ENST00000461228 CNOT6Q9ULM6 557 aaKnown RBP14.39□□□□□ -0.11
DNMT3A-207ENST00000461228 ABCA12Q86UK0 2595 aa14.39□□□□□ -0.11
DNMT3A-207ENST00000461228 AGRPO00253 132 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 CHUKO15111 745 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 VEGFDO43915 354 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 MTA2O94776 668 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 PRKAR1AP10644 381 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 FGF5P12034 268 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 MPSTP25325 297 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 SPINT3P49223 89 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 ZNF165P49910 485 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 EPHB1P54762 984 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 PAFAH1B3Q15102 231 aaKnown RBP14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 SLC14A2Q15849 920 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 SMTNL2Q2TAL5 461 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 WASH2PQ6VEQ5 465 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 KDELC2Q7Z4H8 507 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 TRIM74Q86UV6 250 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 GALNT11Q8NCW6 608 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 WDR24Q96S15 920 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 TIMM29Q9BSF4 260 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 ZSCAN5AQ9BUG6 496 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 RIOK2Q9BVS4 552 aaKnown RBP14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 XPO4Q9C0E2 1151 aaKnown RBP14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 BRD8Q9H0E9 1235 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 APMAPQ9HDC9 416 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 WASH6PQ9NQA3 447 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 RAD18Q9NS91 495 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 EPHA6Q9UF33 1036 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 CD84Q9UIB8 345 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 TP53TG5Q9Y2B4 290 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 TMEM98Q9Y2Y6 226 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 PLEKHM1Q9Y4G2 1056 aa14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 OAS3Q9Y6K5 1087 aaKnown RBP14.38□□□□□ -0.11
DNMT3A-207ENST00000461228 LRRC53A6NM62 1247 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 MATN3O15232 486 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 PRLP01236 227 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 FTLP02792 175 aaPredicted RBP14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 RARAP10276 462 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 ACP5P13686 325 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 CTPS1P17812 591 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 AMPD1P23109 780 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 CCNCP24863 283 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 IFI16Q16666 785 aaKnown RBP14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 DEFB109BQ30KR1 87 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 FIGNQ5HY92 759 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 ZNF569Q5MCW4 686 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 CCDC183Q5T5S1 534 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 AGAP9Q5VTM2 703 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 C6orf15Q6UXA7 325 aaPredicted RBP14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 TMEM26Q6ZUK4 368 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 MARK2Q7KZI7 788 aaKnown RBP14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 BPHLQ86WA6 291 aaPredicted RBP14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 ZNF761Q86XN6 746 aaPredicted RBP14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 NCSTNQ92542 709 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 AGAP2Q99490 1192 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 NT5MQ9NPB1 228 aa14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 ZNF71Q9NQZ8 489 aaPredicted RBP14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 CUEDC1Q9NWM3 386 aaPredicted RBP14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 PCDHGA9Q9Y5G4 932 aaKnown RBP14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 PCYT1BQ9Y5K3 369 aaPredicted RBP14.37□□□□□ -0.11
DNMT3A-207ENST00000461228 C1orf232A0A0U1RR37 186 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 TTC24A2A3L6 582 aaPredicted RBP14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 FADS2P1A8MWK0 482 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 DDX3XO00571 662 aaKnown RBP eCLIP14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 GRID2O43424 1007 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 MFSD11O43934 449 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 MX2P20592 715 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 NFATC2Q13469 925 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 ASIC2Q16515 512 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 ANKRD20A8PQ5CZ79 823 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 PAPD7Q5XG87 772 aaKnown RBP14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 NCBP2-AS2Q69YL0 99 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 RFLNAQ6ZTI6 216 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 CHST15Q7LFX5 561 aaPredicted RBP14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 ZNF571Q7Z3V5 609 aaPredicted RBP14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 HPS6Q86YV9 775 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 ARRDC2Q8TBH0 407 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 CCHCR1Q8TD31 782 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 KLHL6Q8WZ60 621 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 FAF2Q96CS3 445 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 HDAC11Q96DB2 347 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 STAMBPL1Q96FJ0 436 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 CTRCQ99895 268 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 FAM83DQ9H4H8 585 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 HAUS4Q9H6D7 363 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 PCDH9Q9HC56 1237 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 PRDM8Q9NQV8 689 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 OGFRQ9NZT2 677 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 ZNHIT2Q9UHR6 403 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 LCMT1Q9UIC8 334 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 CROTQ9UKG9 612 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 KCNK6Q9Y257 313 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 PCDHGB7Q9Y5F8 929 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 PCM1Q15154 2024 aa14.36□□□□□ -0.11
DNMT3A-207ENST00000461228 ESPL1Q14674 2120 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms