RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 GPR17Q13304 367 aa15.33■□□□□ 0.05
LMNB1-203ENST00000460265 SERINC3Q13530 473 aa15.33■□□□□ 0.05
LMNB1-203ENST00000460265 GPR141Q7Z602 305 aa15.33■□□□□ 0.05
LMNB1-203ENST00000460265 RP9Q8TA86 221 aaKnown RBP15.33■□□□□ 0.05
LMNB1-203ENST00000460265 KCNA7Q96RP8 456 aa15.33■□□□□ 0.05
LMNB1-203ENST00000460265 GPR21Q99679 349 aa15.33■□□□□ 0.05
LMNB1-203ENST00000460265 HIPK3Q9H422 1215 aa15.33■□□□□ 0.05
LMNB1-203ENST00000460265 GID8Q9NWU2 228 aa15.33■□□□□ 0.05
LMNB1-203ENST00000460265 C6orf203Q9P0P8 240 aaPredicted RBP15.33■□□□□ 0.05
LMNB1-203ENST00000460265 PKP3Q9Y446 797 aa15.33■□□□□ 0.05
LMNB1-203ENST00000460265 MOXD2PA6NHM9 499 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 IQCF5A8MTL0 148 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 ARVCFO00192 962 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 MRASO14807 208 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 MUSKO15146 869 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 GPR39O43194 453 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 IL1BP01584 269 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 WEE1P30291 646 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 USP41Q3LFD5 358 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 PARP15Q460N3 678 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 ELMSAN1Q6PJG2 1045 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 BNIPLQ7Z465 357 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 LINC01599Q8WXQ3 324 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 RTKNQ9BST9 563 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 TMEM248Q9NWD8 314 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 FCF1Q9Y324 198 aaKnown RBP15.33■□□□□ 0.04
LMNB1-203ENST00000460265 HOXC8P31273 242 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 CAP1Q01518 475 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 TSNQ15631 228 aaKnown RBP15.33■□□□□ 0.04
LMNB1-203ENST00000460265 SMUG1Q53HV7 270 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 SETD3Q86TU7 594 aaPredicted RBP15.33■□□□□ 0.04
LMNB1-203ENST00000460265 SLC22A9Q8IVM8 553 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 CDKN2AIPNLQ96HQ2 116 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 ATAD3AQ9NVI7 634 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 FKBPLQ9UIM3 349 aa15.33■□□□□ 0.04
LMNB1-203ENST00000460265 J3QRK9 145 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 GRID2O43424 1007 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 AKAP10O43572 662 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 FGF1P05230 155 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 ATP5BP06576 529 aaKnown RBP15.32■□□□□ 0.04
LMNB1-203ENST00000460265 GJA1P17302 382 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 MC4RP32245 332 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 CDKN1CP49918 316 aaPredicted RBP15.32■□□□□ 0.04
LMNB1-203ENST00000460265 CD300CQ08708 224 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 ITGADQ13349 1161 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 TRIM16LQ309B1 348 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 STARD8Q92502 1023 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 FBXL8Q96CD0 374 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 ITPKCQ96DU7 683 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 NSUN5Q96P11 429 aaKnown RBP15.32■□□□□ 0.04
LMNB1-203ENST00000460265 C1orf50Q9BV19 199 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 RAI2Q9Y5P3 530 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 SLC7A4O43246 635 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 VPS26AO75436 327 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 NDST3O95803 873 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 S100BP04271 92 aaPredicted RBP15.32■□□□□ 0.04
LMNB1-203ENST00000460265 ZNF23P17027 643 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 HLA-DPA1P20036 260 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 YBEYP58557 167 aaPredicted RBP15.32■□□□□ 0.04
LMNB1-203ENST00000460265 PSME3P61289 254 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 FAM45BPQ6NSW5 357 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 PGBD5Q8N414 524 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 ARL14EPQ8N8R7 260 aaPredicted RBP15.32■□□□□ 0.04
LMNB1-203ENST00000460265 FAM45AQ8TCE6 357 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 PTCD2Q8WV60 388 aaKnown RBP15.32■□□□□ 0.04
LMNB1-203ENST00000460265 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.32■□□□□ 0.047e-6■■■■■ 27.5
LMNB1-203ENST00000460265 RPL10LQ96L21 214 aaKnown RBP15.32■□□□□ 0.04
LMNB1-203ENST00000460265 C1orf74Q96LT6 269 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 TRIM8Q9BZR9 551 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 EBF1Q9UH73 591 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 EGFL7Q9UHF1 273 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 ZMYM5Q9UJ78 669 aa15.32■□□□□ 0.04
LMNB1-203ENST00000460265 MKI67P46013 3256 aaKnown RBP15.32■□□□□ 0.04
LMNB1-203ENST00000460265 EIF3FO00303 357 aaPredicted RBP15.31■□□□□ 0.04
LMNB1-203ENST00000460265 NBNO60934 754 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 HGFP14210 728 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 EEF1DP29692 281 aaKnown RBP15.31■□□□□ 0.04
LMNB1-203ENST00000460265 GKP32189 559 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 APOFQ13790 326 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 ZNF829Q3KNS6 432 aaPredicted RBP15.31■□□□□ 0.04
LMNB1-203ENST00000460265 DEPDC1Q5TB30 811 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 KDELC1Q6UW63 502 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 KIAA0408Q6ZU52 694 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 OR13J1Q8NGT2 312 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 CNDP1Q96KN2 507 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 NSMCE3Q96MG7 304 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 KLHL25Q9H0H3 589 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 GIN1Q9NXP7 522 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 NIPSNAP2O75323 286 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 RPP40O75818 363 aaKnown RBP15.31■□□□□ 0.04
LMNB1-203ENST00000460265 PRKAA2P54646 552 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 CDH15P55291 814 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 TUBB3Q13509 450 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 BRSK1Q8TDC3 778 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 ZBED2Q9BTP6 218 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 ADGRE3Q9BY15 652 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 UPF3AQ9H1J1 476 aaKnown RBP15.31■□□□□ 0.04
LMNB1-203ENST00000460265 SYTL2Q9HCH5 934 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 C2orf78A6NCI8 922 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 ESRRBO95718 433 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms