RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 IGDCC3Q8IVU1 814 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 LEMD2Q8NC56 503 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 ALG2Q9H553 416 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 DNAJB4Q9UDY4 337 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 ADAM30Q9UKF2 790 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 ESR1P03372 595 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 ALOX12P18054 663 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 HSPA7P48741 367 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 ZDHHC20Q5W0Z9 365 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 TAPT1Q6NXT6 567 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 SERPINA13PQ6UXR4 307 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 FIBCD1Q8N539 461 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 C19orf18Q8NEA5 215 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 PLEKHG4BQ96PX9 1271 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 NPY6RQ99463 290 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 HIPK3Q9H422 1215 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 VRTNQ9H8Y1 702 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 FKBPLQ9UIM3 349 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 PAICSP22234 425 aaKnown RBP14.68□□□□□ -0.06
PTPRU-205ENST00000460170 PRKAG1P54619 331 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 AQP4P55087 323 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 SULT2A1Q06520 285 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 SPIDRQ14159 915 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 TMEM198Q66K66 360 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 TIFABQ6ZNK6 161 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 PAGE2Q7Z2X7 111 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 ZNF438Q7Z4V0 828 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 CBR4Q8N4T8 237 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 CENPIQ92674 756 aaPredicted RBP14.68□□□□□ -0.06
PTPRU-205ENST00000460170 FEM1CQ96JP0 617 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 SYT17Q9BSW7 474 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 TDRD1Q9BXT4 1180 aaKnown RBP14.68□□□□□ -0.06
PTPRU-205ENST00000460170 NUAK2Q9H093 628 aa14.68□□□□□ -0.06
PTPRU-205ENST00000460170 CAPN15O75808 1086 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 OR4F21O95013 312 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 UMPSP11172 480 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 MFSD4BQ5TF39 518 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 OSTM1Q86WC4 334 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 DEPDC4Q8N2C3 294 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 C1QTNF7Q9BXJ2 289 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 DNAJC11Q9NVH1 559 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 INTS10Q9NVR2 710 aaKnown RBP14.67□□□□□ -0.06
PTPRU-205ENST00000460170 PSME2Q9UL46 239 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 SAMD4AQ9UPU9 718 aaKnown RBP14.67□□□□□ -0.06
PTPRU-205ENST00000460170 C10orf71Q711Q0 1435 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 FAM149AA5PLN7 773 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 UGT2B4P06133 528 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 SPATA31D3P0C874 917 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 ITPKAP23677 461 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 PTGER3P43115 390 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 KIR3DL1P43629 444 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 TRIM40Q6P9F5 258 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 SPATA31D4Q6ZUB0 917 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 CPNE9Q8IYJ1 553 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 PHF10Q8WUB8 498 aaKnown RBP14.67□□□□□ -0.06
PTPRU-205ENST00000460170 LRTOMTQ8WZ04 291 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 VPS35Q96QK1 796 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 AP1S1P61966 158 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 LUZP2Q86TE4 346 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 AMER2Q8N7J2 671 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 MYDGFQ969H8 173 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 CENPNQ96H22 339 aaPredicted RBP14.67□□□□□ -0.06
PTPRU-205ENST00000460170 REXO4Q9GZR2 422 aaKnown RBP14.67□□□□□ -0.06
PTPRU-205ENST00000460170 ADAM7Q9H2U9 754 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 EBF3Q9H4W6 596 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 U3KQV3 271 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 SUV39H1O43463 412 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 DYRK3O43781 588 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 CYP7B1O75881 506 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 CNPP09543 421 aaKnown RBP14.67□□□□□ -0.06
PTPRU-205ENST00000460170 ELFN1P0C7U0 828 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 DGKKQ5KSL6 1271 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 ZC3HC1Q86WB0 502 aaKnown RBP14.67□□□□□ -0.06
PTPRU-205ENST00000460170 WDTC1Q8N5D0 677 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 RNFT2Q96EX2 444 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 NUSAP1Q9BXS6 441 aaKnown RBP14.67□□□□□ -0.06
PTPRU-205ENST00000460170 STMN3Q9NZ72 180 aa14.67□□□□□ -0.06
PTPRU-205ENST00000460170 ZNF487B1APH4 448 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 C1QTNF3-AMACRE9PGA6 284 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 GRM6O15303 877 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 IL1BP01584 269 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 CAPN1P07384 714 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 MAGEA10P43363 369 aaPredicted RBP14.66□□□□□ -0.06
PTPRU-205ENST00000460170 LSM3P62310 102 aaKnown RBP14.66□□□□□ -0.06
PTPRU-205ENST00000460170 DEFB115Q30KQ5 88 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 EPHX4Q8IUS5 362 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 USP7Q93009 1102 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 ERLEC1Q96DZ1 483 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 MRPL48Q96GC5 212 aaKnown RBP14.66□□□□□ -0.06
PTPRU-205ENST00000460170 EIF2B4Q9UI10 523 aaKnown RBP14.66□□□□□ -0.06
PTPRU-205ENST00000460170 CLDN9O95484 217 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 ZNF37AP17032 561 aaPredicted RBP14.66□□□□□ -0.06
PTPRU-205ENST00000460170 ADGRE1Q14246 886 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 TAF1AQ15573 450 aaPredicted RBP14.66□□□□□ -0.06
PTPRU-205ENST00000460170 CCL14Q16627 93 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 PDZK1Q5T2W1 519 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 OR52B2Q96RD2 323 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 HBEGFQ99075 208 aa14.66□□□□□ -0.06
PTPRU-205ENST00000460170 SMPD3Q9NY59 655 aaPredicted RBP14.66□□□□□ -0.06
PTPRU-205ENST00000460170 CCDC162PA2VCL2 907 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms