RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 GTF3C3Q9Y5Q9 886 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 ADGRG1Q9Y653 693 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 KCNMB2Q9Y691 235 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 RPS6KL1Q9Y6S9 549 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 UNC79Q9P2D8 2635 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 RGSL1A5PLK6 1076 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 GOLGA6L3A6NEY3 463 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 PRR19A6NJB7 356 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 FADS2P1A8MWK0 482 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 MFSD11O43934 449 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 NUAK1O60285 661 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 CLDN7O95471 211 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 ACP5P13686 325 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 IL4RP24394 825 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 NOP2P46087 812 aaKnown RBP10.31□□□□□ -0.76
HDLBP-227ENST00000458564 SPINT3P49223 89 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 PPM1FP49593 454 aaPredicted RBP10.31□□□□□ -0.76
HDLBP-227ENST00000458564 ZNF165P49910 485 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 DSC2Q02487 901 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 KLRB1Q12918 225 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 PAFAH1B3Q15102 231 aaKnown RBP10.31□□□□□ -0.76
HDLBP-227ENST00000458564 DEFB109BQ30KR1 87 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 TIGD7Q6NT04 549 aaPredicted RBP10.31□□□□□ -0.76
HDLBP-227ENST00000458564 TCTN3Q6NUS6 607 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 SASS6Q6UVJ0 657 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 PHYKPLQ8IUZ5 450 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 LURAP1LQ8IV03 231 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 AOPEPQ8N6M6 819 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 ARRDC2Q8TBH0 407 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 C9orf72Q96LT7 481 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 TSGA13Q96PP4 275 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
HDLBP-227ENST00000458564 KCNK6Q9Y257 313 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 CHKBQ9Y259 395 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 PRKAB1Q9Y478 270 aa10.31□□□□□ -0.76
HDLBP-227ENST00000458564 C1orf232A0A0U1RR37 186 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 MATN3O15232 486 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 GRID2O43424 1007 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 RECKO95980 971 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 XRCC1P18887 633 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-227ENST00000458564 F8A1P23610 371 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 CCNCP24863 283 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 ARSEP51690 589 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 ITKQ08881 620 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 KLHL30Q0D2K2 578 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 IL11RAQ14626 422 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 ATP1A1-AS1Q5TC04 95 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 NCBP2-AS2Q69YL0 99 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 TBC1D10AQ9BXI6 508 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 ULBP3Q9BZM4 244 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 FAM83DQ9H4H8 585 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 ZNF768Q9H5H4 540 aaKnown RBP10.3□□□□□ -0.76
HDLBP-227ENST00000458564 PCDH9Q9HC56 1237 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 PKD2L2Q9NZM6 624 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 OGFRQ9NZT2 677 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 NFKBIL1Q9UBC1 381 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-227ENST00000458564 MYO1AQ9UBC5 1043 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 KLHL3Q9UH77 587 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 POLHQ9Y253 713 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 PLAAQ9Y263 795 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 TP53TG5Q9Y2B4 290 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 PCDHB3Q9Y5E6 796 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 PCDHGA6Q9Y5G7 932 aa10.3□□□□□ -0.76
HDLBP-227ENST00000458564 MRPS18BQ9Y676 258 aaKnown RBP10.3□□□□□ -0.76
HDLBP-227ENST00000458564 RP1L1Q8IWN7 2480 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-227ENST00000458564 ANKRD66B4E2M5 251 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 MKRN2OSH3BPM6 223 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 CHUKO15111 745 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 SNX2O60749 519 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 HLA-DQB2P05538 268 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 CD48P09326 243 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 ZNF28P17035 718 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 DLSTP36957 453 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 MAPK9P45984 424 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 PMS2P54278 862 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 GFERP55789 205 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 DCDC1P59894 354 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 NIPAL4Q0D2K0 466 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 KRT81Q14533 505 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 IFI16Q16666 785 aaKnown RBP10.29□□□□□ -0.76
HDLBP-227ENST00000458564 QPCTQ16769 361 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 ANKRD20A8PQ5CZ79 823 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 CCDC183Q5T5S1 534 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 PDPK2PQ6A1A2 396 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 C16orf46Q6P387 395 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 C6orf15Q6UXA7 325 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-227ENST00000458564 TMEM26Q6ZUK4 368 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 PRSS42Q7Z5A4 293 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 ATCAYQ86WG3 371 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 LPCAT1Q8NF37 534 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 CCHCR1Q8TD31 782 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 PLEKHG4BQ96PX9 1271 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 ZNF670Q9BS34 389 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 PRDM8Q9NQV8 689 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 RBM22Q9NW64 420 aaKnown RBP eCLIP10.29□□□□□ -0.761e-15■■■□□ 17.7
HDLBP-227ENST00000458564 ATXN10Q9UBB4 475 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 IP6K2Q9UHH9 426 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 ANAPC7Q9UJX3 599 aa10.29□□□□□ -0.76
HDLBP-227ENST00000458564 KCND3Q9UK17 655 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms