RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 MC1RQ01726 317 aa21.31■■□□□ 1
CPNE1-220ENST00000458038 ABHD18Q0P651 414 aa21.31■■□□□ 1
CPNE1-220ENST00000458038 IHHQ14623 411 aa21.31■■□□□ 1
CPNE1-220ENST00000458038 ALKBH5Q6P6C2 394 aaKnown RBP21.31■■□□□ 1
CPNE1-220ENST00000458038 ZNF761Q86XN6 746 aaPredicted RBP21.31■■□□□ 1
CPNE1-220ENST00000458038 PLXDC1Q8IUK5 500 aa21.31■■□□□ 1
CPNE1-220ENST00000458038 LPCAT1Q8NF37 534 aa21.31■■□□□ 1
CPNE1-220ENST00000458038 SMIM14Q96QK8 99 aa21.31■■□□□ 1
CPNE1-220ENST00000458038 WDR24Q96S15 920 aa21.31■■□□□ 1
CPNE1-220ENST00000458038 TMEM184BQ9Y519 407 aaPredicted RBP21.31■■□□□ 1
CPNE1-220ENST00000458038 OAS3Q9Y6K5 1087 aaKnown RBP21.31■■□□□ 1
CPNE1-220ENST00000458038 A0A087X0T9 212 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 A6NCN8 305 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 GRID2O43424 1007 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 EML2O95834 649 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 FAM228BP0C875 321 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 NIPAL4Q0D2K0 466 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 NFATC2Q13469 925 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 NFKBIBQ15653 356 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 CRTC2Q53ET0 693 aaPredicted RBP21.3■■□□□ 1
CPNE1-220ENST00000458038 SNAP47Q5SQN1 464 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 PHYKPLQ8IUZ5 450 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.3■■□□□ 1
CPNE1-220ENST00000458038 FAF2Q96CS3 445 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 HDAC11Q96DB2 347 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 UCK1Q9HA47 277 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 RAD18Q9NS91 495 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 DOPEY2Q9Y3R5 2298 aa21.3■■□□□ 1
CPNE1-220ENST00000458038 LRRK2Q5S007 2527 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 LILRA5A6NI73 299 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 A8MU76 341 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 POLR1CO15160 346 aaPredicted RBP21.29■■□□□ 1
CPNE1-220ENST00000458038 NUAK1O60285 661 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 HLA-DQB2P05538 268 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 ACP5P13686 325 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 TPM4P67936 248 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 QPCTQ16769 361 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 ZNF830Q96NB3 372 aaPredicted RBP21.29■■□□□ 1
CPNE1-220ENST00000458038 UVRAGQ9P2Y5 699 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 CPNE7Q9UBL6 633 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 CAPN11Q9UMQ6 739 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 KCNK6Q9Y257 313 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 PRKAB1Q9Y478 270 aa21.29■■□□□ 1
CPNE1-220ENST00000458038 FADS2P1A8MWK0 482 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 PROSCO94903 275 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 ANKRD34CP0C6C1 535 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 TLE1Q04724 770 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 MAP7Q14244 749 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 IQCB1Q15051 598 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 ATP13A4Q4VNC1 1196 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 PDPK2PQ6A1A2 396 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 CCDC13Q8IYE1 715 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 CCNYQ8ND76 341 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 ZSCAN5AQ9BUG6 496 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 TRIM39Q9HCM9 518 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 ANAPC2Q9UJX6 822 aa21.28■■□□□ 1
CPNE1-220ENST00000458038 LUC7L2Q9Y383 392 aaKnown RBP21.28■■□□□ 1
CPNE1-220ENST00000458038 TOX3O15405 576 aaPredicted RBP21.27■■□□□ 1
CPNE1-220ENST00000458038 SNX2O60749 519 aa21.27■■□□□ 1
CPNE1-220ENST00000458038 STK17BO94768 372 aa21.27■■□□□ 1
CPNE1-220ENST00000458038 XRCC1P18887 633 aaPredicted RBP21.27■■□□□ 1
CPNE1-220ENST00000458038 PBX1P40424 430 aa21.27■■□□□ 1
CPNE1-220ENST00000458038 DCDC1P59894 354 aa21.27■■□□□ 1
CPNE1-220ENST00000458038 KDELC2Q7Z4H8 507 aa21.27■■□□□ 1
CPNE1-220ENST00000458038 ESX1Q8N693 406 aa21.27■■□□□ 1
CPNE1-220ENST00000458038 APOBEC4Q8WW27 367 aaKnown RBP21.27■■□□□ 1
CPNE1-220ENST00000458038 CTRCQ99895 268 aa21.27■■□□□ 1
CPNE1-220ENST00000458038 ZFYVE1Q9HBF4 777 aa21.27■■□□□ 1
CPNE1-220ENST00000458038 CTTNBP2NLQ9P2B4 639 aa21.27■■□□□ 1
CPNE1-220ENST00000458038 PCYT1BQ9Y5K3 369 aaPredicted RBP21.27■■□□□ 1
CPNE1-220ENST00000458038 MN1Q10571 1320 aaPredicted RBP21.27■□□□□ 0.99
CPNE1-220ENST00000458038 ZNF487B1APH4 448 aa21.26■□□□□ 0.99
CPNE1-220ENST00000458038 SLC25A14O95258 325 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-220ENST00000458038 JCHAINP01591 159 aa21.26■□□□□ 0.99
CPNE1-220ENST00000458038 MMP2P08253 660 aa21.26■□□□□ 0.99
CPNE1-220ENST00000458038 GJC1P36383 396 aa21.26■□□□□ 0.99
CPNE1-220ENST00000458038 CD86P42081 329 aa21.26■□□□□ 0.99
CPNE1-220ENST00000458038 GBE1Q04446 702 aa21.26■□□□□ 0.99
CPNE1-220ENST00000458038 CDC20Q12834 499 aa21.26■□□□□ 0.99
CPNE1-220ENST00000458038 PQLC3Q8N755 202 aa21.26■□□□□ 0.99
CPNE1-220ENST00000458038 C9orf43Q8TAL5 461 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-220ENST00000458038 SPATA16Q9BXB7 569 aa21.26■□□□□ 0.99
CPNE1-220ENST00000458038 DTLQ9NZJ0 730 aa21.26■□□□□ 0.99
CPNE1-220ENST00000458038 ATXN10Q9UBB4 475 aa21.26■□□□□ 0.99
CPNE1-220ENST00000458038 NFKBIL1Q9UBC1 381 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-220ENST00000458038 LOC101059948A0A1B0GTJ6 334 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 NKX2-8O15522 239 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 DLGAP3O95886 979 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 C9P02748 559 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 H2AFZP0C0S5 128 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 CASRP41180 1078 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 MAPK9P45984 424 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 UBASH3AP57075 661 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 UBE2IP63279 158 aaKnown RBP21.25■□□□□ 0.99
CPNE1-220ENST00000458038 IFI35P80217 286 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-220ENST00000458038 FANCCQ00597 558 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 PPIDQ08752 370 aaKnown RBP21.25■□□□□ 0.99
CPNE1-220ENST00000458038 SLC10A2Q12908 348 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-220ENST00000458038 ZNF569Q5MCW4 686 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 H2AFVQ71UI9 128 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms