RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 USP24Q9UPU5 2620 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 ARHGEF17Q96PE2 2063 aaPredicted RBP22.94■■□□□ 1.26
CBX3-204ENST00000456948 GLYATL1P3A0A0U1RQE8 302 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 ERI2A8K979 691 aaKnown RBP22.94■■□□□ 1.26
CBX3-204ENST00000456948 RHPN2P1A8MT19 583 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 IFNB1P01574 187 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 AK4P27144 223 aaPredicted RBP22.94■■□□□ 1.26
CBX3-204ENST00000456948 LMAN1P49257 510 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 CCNG2Q16589 344 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 PERM1Q5SV97 790 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 CHST15Q7LFX5 561 aaPredicted RBP22.94■■□□□ 1.26
CBX3-204ENST00000456948 MARCH9Q86YJ5 346 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 ATG4AQ8WYN0 398 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 CCDC74AQ96AQ1 378 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 RTP4Q96DX8 246 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 C19orf43Q9BQ61 176 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 APOL2Q9BQE5 337 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 OR2AG1Q9H205 316 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 STN1Q9H668 368 aaKnown RBP22.94■■□□□ 1.26
CBX3-204ENST00000456948 ARNT2Q9HBZ2 717 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 IL26Q9NPH9 171 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 LRIT1Q9P2V4 623 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 ATXN10Q9UBB4 475 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 JRKLQ9Y4A0 524 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 OAS3Q9Y6K5 1087 aaKnown RBP22.94■■□□□ 1.26
CBX3-204ENST00000456948 AK5Q9Y6K8 562 aa22.94■■□□□ 1.26
CBX3-204ENST00000456948 RP1P56715 2156 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 E7EVH7 732 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 CEP104O60308 925 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 NOBOXO60393 691 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 DNAJC6O75061 913 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 CDK14O94921 469 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 VCLP18206 1134 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 FDFT1P37268 417 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 HADHAP40939 763 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 CAMK2BQ13554 666 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 HLTFQ14527 1009 aaKnown RBP eCLIP22.93■■□□□ 1.26
CBX3-204ENST00000456948 LDLRAP1Q5SW96 308 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 C4orf22Q6V702 233 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 NRROSQ86YC3 692 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 C1orf54Q8WWF1 131 aa22.93■■□□□ 1.26
CBX3-204ENST00000456948 GFM1Q96RP9 751 aaKnown RBP22.93■■□□□ 1.26
CBX3-204ENST00000456948 KMOO15229 486 aa22.92■■□□□ 1.26
CBX3-204ENST00000456948 CSO75390 466 aaKnown RBP22.92■■□□□ 1.26
CBX3-204ENST00000456948 FGGP02679 453 aa22.92■■□□□ 1.26
CBX3-204ENST00000456948 SNX1Q13596 522 aa22.92■■□□□ 1.26
CBX3-204ENST00000456948 OASLQ15646 514 aaKnown RBP22.92■■□□□ 1.26
CBX3-204ENST00000456948 LONRF2Q1L5Z9 754 aa22.92■■□□□ 1.26
CBX3-204ENST00000456948 ATP13A5Q4VNC0 1218 aa22.92■■□□□ 1.26
CBX3-204ENST00000456948 AVL9Q8NBF6 648 aa22.92■■□□□ 1.26
CBX3-204ENST00000456948 GORASP1Q9BQQ3 440 aa22.92■■□□□ 1.26
CBX3-204ENST00000456948 TLR10Q9BXR5 811 aa22.92■■□□□ 1.26
CBX3-204ENST00000456948 DKK4Q9UBT3 224 aa22.92■■□□□ 1.26
CBX3-204ENST00000456948 DRG1Q9Y295 367 aaKnown RBP22.92■■□□□ 1.26
CBX3-204ENST00000456948 ASPMQ8IZT6 3477 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 KIF5CO60282 957 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 METTL18O95568 372 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 ECEL1O95672 775 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 AP2A1O95782 977 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 ZNF8P17098 575 aaPredicted RBP22.91■■□□□ 1.26
CBX3-204ENST00000456948 GDF10P55107 478 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 CLDN6P56747 220 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 LAMB3Q13751 1172 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 SPARCL1Q14515 664 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 ISXQ2M1V0 245 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 DRICH1Q6PGQ1 229 aaPredicted RBP22.91■■□□□ 1.26
CBX3-204ENST00000456948 FAM151BQ6UXP7 276 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 GSTA5Q7RTV2 222 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 LRRTM4Q86VH4 590 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 CCNJLQ8IV13 435 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 KLHDC8BQ8IXV7 354 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 LSMEM2Q8N112 164 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 ARL14Q8N4G2 192 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 OR4K2Q8NGD2 314 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 ZNF398Q8TD17 642 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 PTCD2Q8WV60 388 aaKnown RBP22.91■■□□□ 1.26
CBX3-204ENST00000456948 NAP1L3Q99457 506 aaPredicted RBP22.91■■□□□ 1.26
CBX3-204ENST00000456948 LRRN3Q9H3W5 708 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 PAK5Q9P286 719 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 ARL5AQ9Y689 179 aa22.91■■□□□ 1.26
CBX3-204ENST00000456948 MYLKQ15746 1914 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 OR5K4A6NMS3 321 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 KCNJ13O60928 360 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 USP12O75317 370 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 ACP5P13686 325 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 GPR3P46089 330 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 CYP4F3Q08477 520 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 TMEM115Q12893 351 aaPredicted RBP22.9■■□□□ 1.26
CBX3-204ENST00000456948 CHRNA6Q15825 494 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 INSCQ1MX18 579 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 KCTD11Q693B1 232 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 ADGRG6Q86SQ4 1221 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 Q8N9G6 341 aaPredicted RBP22.9■■□□□ 1.26
CBX3-204ENST00000456948 PBKQ96KB5 322 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 STRADBQ9C0K7 418 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 ARFGAP3Q9NP61 516 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 PRKAB1Q9Y478 270 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 RNF215Q9Y6U7 377 aa22.9■■□□□ 1.26
CBX3-204ENST00000456948 IGF2RP11717 2491 aa22.89■■□□□ 1.26
CBX3-204ENST00000456948 SRRM3A6NNA2 597 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms