RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 MTRRQ9UBK8 725 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 TANC1Q9C0D5 1861 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 TCRBV3S1A0A5B6 114 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 DRGXA6NNA5 263 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 H3BMM5 538 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 AP3B1O00203 1094 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 SRP72O76094 671 aaKnown RBP12.35□□□□□ -0.43
LINC00959-201ENST00000456581 HNRNPCP07910 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00959-201ENST00000456581 LINC00032P0C843 101 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 ZNF23P17027 643 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 ATP5C1P36542 298 aaKnown RBP12.35□□□□□ -0.43
LINC00959-201ENST00000456581 CASP2P42575 452 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 FRG1Q14331 258 aaKnown RBP12.35□□□□□ -0.43
LINC00959-201ENST00000456581 SQLEQ14534 574 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 UGT3A2Q3SY77 523 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 TMEM259Q4ZIN3 620 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 RABL3Q5HYI8 236 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 SIRPB2Q5JXA9 342 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 HECTD2Q5U5R9 776 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 OR13J1Q8NGT2 312 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 ESAMQ96AP7 390 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 VPS33AQ96AX1 596 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 TEX37Q96LM6 180 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 OLA1Q9NTK5 396 aaKnown RBP12.35□□□□□ -0.43
LINC00959-201ENST00000456581 SLAMF8Q9P0V8 285 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 TMEM181Q9P2C4 612 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 MYRFQ9Y2G1 1151 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 DNAJC15Q9Y5T4 150 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 NUP214P35658 2090 aaPredicted RBP12.35□□□□□ -0.43
LINC00959-201ENST00000456581 A0A0J9YYE9 177 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 UBXN8O00124 270 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 STAMBPO95630 424 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 BMP1P13497 986 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 NR4A1P22736 598 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 TXNL4AP83876 142 aaKnown RBP12.35□□□□□ -0.43
LINC00959-201ENST00000456581 PFKPQ01813 784 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 STX5Q13190 355 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 PLCL1Q15111 1095 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 UGP2Q16851 508 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 FGD3Q5JSP0 725 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 OGFOD2Q6N063 350 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 DDIASQ8IXT1 998 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 CYGBQ8WWM9 190 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 HDAC10Q969S8 669 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 TMEM175Q9BSA9 504 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 ZNF510Q9Y2H8 683 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 MAGED1Q9Y5V3 778 aaPredicted RBP12.35□□□□□ -0.43
LINC00959-201ENST00000456581 ARL5AQ9Y689 179 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 CEP290O15078 2479 aa12.35□□□□□ -0.43
LINC00959-201ENST00000456581 A0A1W2PPW3 197 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 F5H5T6 163 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 PIP5K1BO14986 540 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 HOXA2O43364 376 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 ACRP10323 421 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 SLC7A1P30825 629 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 ALDH3B2P48448 385 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 SERPINH1P50454 418 aaKnown RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 DIO3P55073 304 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 DCTN2Q13561 401 aaKnown RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 PYCR3Q53H96 274 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 HABP4Q5JVS0 413 aaKnown RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 TBCELQ5QJ74 424 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 LARP4Q71RC2 724 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 DNAJB14Q8TBM8 379 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 C12orf43Q96C57 262 aaKnown RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 C19orf60Q96EN9 201 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 BCAP29Q9UHQ4 241 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 TSR3Q9UJK0 312 aaKnown RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 DNMT3LQ9UJW3 386 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 OAZ3Q9UMX2 235 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 TIMM22Q9Y584 194 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 MYOFQ9NZM1 2061 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 NCF1BA6NI72 391 aaPredicted RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 NCF1CA8MVU1 366 aaPredicted RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 J3QRK9 145 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 SLC22A2O15244 555 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 ACSL4O60488 711 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 EFEMP2O95967 443 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 LTA4HP09960 611 aaKnown RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 NCF1P14598 390 aaPredicted RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 CORO1AP31146 461 aaKnown RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 POLR2IP36954 125 aaKnown RBP12.34□□□□□ -0.43
LINC00959-201ENST00000456581 HADHAP40939 763 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 PLIN5Q00G26 463 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 PFKFB4Q16877 469 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 UNC50Q53HI1 259 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 BLOC1S5Q8TDH9 187 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 FBXL8Q96CD0 374 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 TMEM74Q96NL1 305 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 OSBPL11Q9BXB4 747 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 TUBB1Q9H4B7 451 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 PLK2Q9NYY3 685 aa12.34□□□□□ -0.43
LINC00959-201ENST00000456581 STC2O76061 302 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 ATXN1LP0C7T5 689 aaKnown RBP12.33□□□□□ -0.43
LINC00959-201ENST00000456581 COL6A2P12110 1019 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 GPX3P22352 226 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 VARSP26640 1264 aaKnown RBP12.33□□□□□ -0.43
LINC00959-201ENST00000456581 HSPA13P48723 471 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 ZXDBP98169 803 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms