RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 TRAPPC12Q8WVT3 735 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 SNAPC3Q92966 411 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PTERQ96BW5 349 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ELMO2Q96JJ3 720 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 DMRTA2Q96SC8 542 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 TCF12Q99081 682 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PCYT2Q99447 389 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 MS4A7Q9GZW8 240 aaPredicted RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 MRPL46Q9H2W6 279 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 DBNDD1Q9H9R9 158 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 VAPAQ9P0L0 249 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CSADQ9Y600 493 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 IKBKGQ9Y6K9 419 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 LCTP09848 1927 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 TAF4O00268 1085 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 TRDMT1O14717 391 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CRYZL1O95825 349 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 LRPAP1P30533 357 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 HCAR3P49019 387 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 SMSP52788 366 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 EFR3AQ14156 821 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PARP15Q460N3 678 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CCDC149Q6ZUS6 474 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 HFE2Q6ZVN8 426 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PAGE2Q7Z2X7 111 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 DPP9Q86TI2 863 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ANKRD13AQ8IZ07 590 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 TCAIMQ8N3R3 496 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 NLGN4YQ8NFZ3 816 aaPredicted RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 OR11H4Q8NGC9 324 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 RAET1EQ8TD07 263 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 SYTL5Q8TDW5 730 aaPredicted RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 NSUN6Q8TEA1 469 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 HEXDCQ8WVB3 486 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 RAD21L1Q9H4I0 556 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 AKTIPQ9H8T0 292 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CCDC177Q9NQR7 707 aaPredicted RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 AGTPBP1Q9UPW5 1226 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CARD8Q9Y2G2 431 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 RAP2CQ9Y3L5 183 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 MAU2Q9Y6X3 613 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 TRAV19A0A0A6YYK7 116 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 FAM92AA1XBS5 289 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 NT5C1B-RDH14C9J2C7 533 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 ZBTB24O43167 697 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 GJB3O75712 270 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 CYP7B1O75881 506 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 BEST1O76090 585 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 CDK14O94921 469 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 C1RP00736 705 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 TGM2P21980 687 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 OR3A3P47888 321 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 ARSDP51689 593 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 HNRNPFP52597 415 aaKnown RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 NDST1P52848 882 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 ACTR2P61160 394 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 LAMC2Q13753 1193 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 RFTN1Q14699 578 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 ATAD3CQ5T2N8 411 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 TMTC4Q5T4D3 741 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 FAM102AQ5T9C2 384 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 IER5Q5VY09 327 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 KDM4DQ6B0I6 523 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 REP15Q6BDI9 236 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 ENPP6Q6UWR7 440 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 RFX6Q8HWS3 928 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 FAM217AQ8IXS0 508 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 SPERTQ8NA61 448 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 KCTD6Q8NC69 237 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 PPP1R14CQ8TAE6 165 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 WDR89Q96FK6 387 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF583Q96ND8 569 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 DACH2Q96NX9 599 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 RBBP8Q99708 897 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 ILKAPQ9H0C8 392 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 CHST12Q9NRB3 414 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 SMPD3Q9NY59 655 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 NYAP2Q9P242 653 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 PCDH10Q9P2E7 1040 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 CRNNQ9UBG3 495 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 FBXO9Q9UK97 447 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 OR51F1A6NGY5 319 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 H0YJX3 145 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 H3BM21 787 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC1A7O00341 560 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 MRASO14807 208 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 TEX28O15482 410 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 NUPL2O15504 423 aaKnown RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 HSPA4LO95757 839 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 MT-ND2P03891 347 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 CSF2P04141 144 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 GSTM1P09488 218 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 AFF1P51825 1210 aaKnown RBP4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 DGKQP52824 942 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 PPP5CP53041 499 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 TMBIM6P55061 237 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 CTAG1AP78358 180 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 MGAT3Q09327 533 aa4.51□□□□□ -1.69
DEPDC1-202ENST00000456315 TRIM32Q13049 653 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms