RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 JMJD7P0C870 316 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 HLA-DPA1P20036 260 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 ALDH4A1P30038 563 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 UGT1A5P35504 534 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 HMGCLP35914 325 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 RWDD2BP57060 319 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 TMPRSS3P57727 454 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 GPLD1P80108 840 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 ITPRIPL1Q6GPH6 555 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 KDELC1Q6UW63 502 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 RAD9BQ6WBX8 426 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 CHST15Q7LFX5 561 aaPredicted RBP17.69■□□□□ 0.42
MSH6-207ENST00000456246 KIAA1328Q86T90 577 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 ZNF567Q8N184 647 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 SFRP1Q8N474 314 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 GPR26Q8NDV2 337 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 DTX3LQ8TDB6 740 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 GLYATL1Q969I3 302 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 HAUS1Q96CS2 278 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 PPP1R2P1Q96PQ5 205 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 HEMGNQ9BXL5 484 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 OSBPL8Q9BZF1 889 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 UBP1Q9NZI7 540 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 ATXN7L1Q9ULK2 861 aaPredicted RBP17.69■□□□□ 0.42
MSH6-207ENST00000456246 LOXL2Q9Y4K0 774 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 IGSF10Q6WRI0 2623 aa17.69■□□□□ 0.42
MSH6-207ENST00000456246 OR5K4A6NMS3 321 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 H7C0C1 242 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 HGSO14964 777 aaPredicted RBP17.68■□□□□ 0.42
MSH6-207ENST00000456246 GRID2O43424 1007 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 B4GAT1O43505 415 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 VEGFDO43915 354 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 PPFIA2O75334 1257 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 ANXA9O76027 345 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 STK10O94804 968 aaKnown RBP17.68■□□□□ 0.42
MSH6-207ENST00000456246 TJP3O95049 919 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 CDC25BP30305 580 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 ATP5OP48047 213 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 CLCNKAP51800 687 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 OR1D5P58170 312 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 SQSTM1Q13501 440 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 TRA2AQ13595 282 aaKnown RBP eCLIP17.68■□□□□ 0.426e-7■■■■■ 32.2
MSH6-207ENST00000456246 ALS2CLQ60I27 953 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 CDKL3Q8IVW4 592 aaPredicted RBP17.68■□□□□ 0.42
MSH6-207ENST00000456246 SYCE1Q8N0S2 351 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 PATE1Q8WXA2 126 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 SH3KBP1Q96B97 665 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 FCRL3Q96P31 734 aaPredicted RBP17.68■□□□□ 0.42
MSH6-207ENST00000456246 VPS35Q96QK1 796 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 UBL7Q96S82 380 aaPredicted RBP17.68■□□□□ 0.42
MSH6-207ENST00000456246 FSD1LQ9BXM9 530 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 SARS2Q9NP81 518 aaKnown RBP17.68■□□□□ 0.42
MSH6-207ENST00000456246 ATXN10Q9UBB4 475 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 RSPH14Q9UHP6 348 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 ACSL6Q9UKU0 697 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 REXO2Q9Y3B8 237 aaKnown RBP17.68■□□□□ 0.42
MSH6-207ENST00000456246 PLEKHM1Q9Y4G2 1056 aa17.68■□□□□ 0.42
MSH6-207ENST00000456246 KIR2DS5A0A0G2JLQ3 304 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 A0A0G2JNG1 304 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 TEX51A0A1B0GUA7 166 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 GOLGA6L6A8MZA4 724 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 KIR2DS3K7RE56 304 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 KLK10O43240 276 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 ACP5P13686 325 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 BPIP17213 487 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 GEMP55040 296 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 KIF5AQ12840 1032 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 KIR2DS5Q14953 304 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 AMZ1Q400G9 498 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 PHF19Q5T6S3 580 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 GPR155Q7Z3F1 870 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 LRRC57Q8N9N7 239 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 SLC37A2Q8TED4 501 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 NAF1Q96HR8 494 aaKnown RBP17.67■□□□□ 0.42
MSH6-207ENST00000456246 B3GNT4Q9C0J1 378 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 GBA3Q9H227 469 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 KCNK4Q9NYG8 393 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 ADGRG1Q9Y653 693 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 DUSP10Q9Y6W6 482 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 AHCTF1Q8WYP5 2266 aa17.67■□□□□ 0.42
MSH6-207ENST00000456246 IGHV1OR21-1A0A087WYE8 117 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 MACROD2A1Z1Q3 448 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 MIF4GDA9UHW6 222 aaKnown RBP17.66■□□□□ 0.42
MSH6-207ENST00000456246 CHUKO15111 745 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 PPM1DO15297 605 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 NVLO15381 856 aaKnown RBP17.66■□□□□ 0.42
MSH6-207ENST00000456246 F3P13726 295 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 ZNF8P17098 575 aaPredicted RBP17.66■□□□□ 0.42
MSH6-207ENST00000456246 CD1CP29017 333 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 OTUD4Q01804 1114 aaKnown RBP17.66■□□□□ 0.42
MSH6-207ENST00000456246 HHEXQ03014 270 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 SLC1A5Q15758 541 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 SIRPB2Q5JXA9 342 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.66■□□□□ 0.42
MSH6-207ENST00000456246 SLC9B2Q86UD5 537 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 GAS2L3Q86XJ1 694 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 UBL4BQ8N7F7 174 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 ACRBPQ8NEB7 543 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 IPMKQ8NFU5 416 aa17.66■□□□□ 0.42
MSH6-207ENST00000456246 OR4D9Q8NGE8 314 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms