RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 WSB2Q9NYS7 404 aaPredicted RBP4.92□□□□□ -1.62
RIF1-207ENST00000454583 COX16Q9P0S2 106 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 VPS9D1Q9Y2B5 631 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 PCDHGC4Q9Y5F7 938 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 CCDC162PA2VCL2 907 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 RPP40O75818 363 aaKnown RBP4.92□□□□□ -1.62
RIF1-207ENST00000454583 AOC1P19801 751 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 CNTFP26441 200 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 VIPR1P32241 457 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 MAPK8P45983 427 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 CTBSQ01459 385 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 GALNT3Q14435 633 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 PPP1R7Q15435 360 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 KLHL38Q2WGJ6 581 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 NAPRTQ6XQN6 538 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 LMNTD2Q8IXW0 634 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 TRAM1L1Q8N609 369 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 ALKBH8Q96BT7 664 aaKnown RBP4.92□□□□□ -1.62
RIF1-207ENST00000454583 AICDAQ9GZX7 198 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 MBNL1Q9NR56 388 aaKnown RBP4.92□□□□□ -1.62
RIF1-207ENST00000454583 INTS10Q9NVR2 710 aaKnown RBP4.92□□□□□ -1.62
RIF1-207ENST00000454583 IL1RAPL1Q9NZN1 696 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 LSM7Q9UK45 103 aaKnown RBP4.92□□□□□ -1.62
RIF1-207ENST00000454583 SH3BP1Q9Y3L3 701 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 PIAS3Q9Y6X2 628 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 A0A1W2PPV9 198 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 UPK3BL1B0FP48 263 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 UPK3BL2E5RIL1 263 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 RGS16O15492 202 aaPredicted RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 USP12O75317 370 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 GOT2P00505 430 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 KCNA5P22460 613 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 ELF3P78545 371 aaPredicted RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 CNTN1Q12860 1018 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 NFATC2Q13469 925 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 PTK2BQ14289 1009 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 DNAJC21Q5F1R6 531 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 SWT1Q5T5J6 900 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 LRRC66Q68CR7 880 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 LEKR1Q6ZMV7 388 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 C3orf62Q6ZUJ4 267 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 FRMD1Q8N878 549 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 PTERQ96BW5 349 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 GRAMD1AQ96CP6 724 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 NTNG2Q96CW9 530 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 MTBPQ96DY7 904 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 APOL5Q9BWW9 433 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 C12orf65Q9H3J6 166 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 BRD9Q9H8M2 597 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 PREBQ9HCU5 417 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 SLCO1B3Q9NPD5 702 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 RSPH14Q9UHP6 348 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 EVLQ9UI08 416 aaPredicted RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 SCML1Q9UN30 329 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 ASB1Q9Y576 335 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 TAPBPO15533 448 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 HAUS5O94927 633 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 UNC5CO95185 931 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 CLDN7O95471 211 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 TOP3BO95985 862 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 CD1DP15813 335 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 C5AR1P21730 350 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 AOAHP28039 575 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 SOX18P35713 384 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 SLC6A12P48065 614 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 GABRA4P48169 554 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 PRLHRP49683 370 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 CSE1LP55060 971 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 KIAA1024LP59773 190 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 HLTFQ14527 1009 aaKnown RBP eCLIP4.91□□□□□ -1.625e-7■■■□□ 15.5
RIF1-207ENST00000454583 TECRLQ5HYJ1 363 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 RBM20Q5T481 1227 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 FAM219BQ5XKK7 198 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 ITPRIPL1Q6GPH6 555 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 CAPRIN2Q6IMN6 1127 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 PGM2L1Q6PCE3 622 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 NEK10Q6ZWH5 1172 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 CHSY3Q70JA7 882 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 CCDC50Q8IVM0 306 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 DENND6AQ8IWF6 608 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 CPSF7Q8N684 471 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 RFWD2Q8NHY2 731 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 TCP10LQ8TDR4 215 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 RAB7BQ96AH8 199 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 DNAJC1Q96KC8 554 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 HEPHQ9BQS7 1158 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 SARGQ9BW04 601 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 OR52A5Q9H2C5 316 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 B4GALT6Q9UBX8 382 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 ASIC3Q9UHC3 531 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 CORO1CQ9ULV4 474 aaPredicted RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 ITM2BQ9Y287 266 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 TSC22D4Q9Y3Q8 395 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 A0A1B0GTL3 188 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 TMEM202A6NGA9 273 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 OR51F1A6NGY5 319 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 UBFD1O14562 309 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 ADH1BP00325 375 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 CEACAM5P06731 702 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 BPGMP07738 259 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms