RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 PSMD11O00231 422 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 NDUFS2O75306 463 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 EPORP19235 508 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 MYL9P24844 172 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 PSMA1P25786 263 aaKnown RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 MC4RP32245 332 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 BIKQ13323 160 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 GALNT3Q14435 633 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 XKR6Q5GH73 641 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 GPR158Q5T848 1215 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 TPGS1Q6ZTW0 290 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 CXXC5Q7LFL8 322 aaKnown RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 PIH1D2Q8WWB5 315 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 ZDHHC6Q9H6R6 413 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 KAT8Q9H7Z6 458 aaKnown RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 LRTM1Q9HBL6 345 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 BPIFA1Q9NP55 256 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 RASSF1Q9NS23 344 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 IGSF9Q9P2J2 1179 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 PPM1HQ9ULR3 514 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 MFHAS1Q9Y4C4 1052 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 TBC1D3BA6NDS4 549 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 CLDN5O00501 218 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 PRMT5O14744 637 aaPredicted RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 UROSP10746 265 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 KIR3DL1P43629 444 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 CLCQ05315 142 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 IL18R1Q13478 541 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 ZBED5Q49AG3 693 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 EMC10Q5UCC4 262 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 C9orf57Q5W0N0 161 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 CLEC6AQ6EIG7 209 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 SLC34A3Q8N130 599 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 FAM156AQ8NDB6 213 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 TAMM41Q96BW9 452 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 ASB9Q96DX5 294 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 DNAJC1Q96KC8 554 aaKnown RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 GPR20Q99678 358 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 FAIM2Q9BWQ8 316 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 PCDHA2Q9Y5H9 948 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 KCNE2Q9Y6J6 123 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 LSM1O15116 133 aaKnown RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 PAGE1O75459 146 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 ENO2P09104 434 aaPredicted RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 PRG2P13727 222 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 AOC1P19801 751 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 POU5F1Q01860 360 aaKnown RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 MERTKQ12866 999 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 PDCD4Q53EL6 469 aaKnown RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 KLHDC10Q6PID8 442 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 OTOP3Q7RTS5 596 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 TRIM74Q86UV6 250 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 TRIM73Q86UV7 250 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 ZZZ3Q8IYH5 903 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 PCDH19Q8TAB3 1148 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 TFAP2BQ92481 460 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 ATP13A3Q9H7F0 1226 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 AGO1Q9UL18 857 aaKnown RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 BTBD19C9JJ37 291 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 AIREO43918 545 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 NR2F1P10589 423 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 ARL2P36404 184 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 MPP1Q00013 466 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 SCN1BQ07699 218 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 USP41Q3LFD5 358 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 IL23RQ5VWK5 629 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 TAPT1Q6NXT6 567 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 GALNT5Q7Z7M9 940 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 ZNF607Q96SK3 696 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 NTPCRQ9BSD7 190 aaKnown RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 SYT17Q9BSW7 474 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 FNDC11Q9BVV2 318 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 APOBEC3GQ9HC16 384 aaKnown RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 ACSS2Q9NR19 701 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 PCDHB1Q9Y5F3 818 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 TLL2Q9Y6L7 1015 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 SMIM35A0A1B0GVV1 85 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 MOXD2PA6NHM9 499 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 PLOD3O60568 738 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 LRATO95237 230 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 S100A9P06702 114 aaKnown RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 CHRNGP07510 517 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 ITGAXP20702 1163 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 MAGP20916 626 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 CCR4P51679 360 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 PAOXQ6QHF9 649 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 COMMD2Q86X83 199 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 DENND6AQ8IWF6 608 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 COLGALT2Q8IYK4 626 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 SIX5Q8N196 739 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 C1orf127Q8N9H9 656 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 TEX47Q8TBZ9 253 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 CSGALNACT1Q8TDX6 532 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 TOP1MTQ969P6 601 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 NUSAP1Q9BXS6 441 aaKnown RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 SUCOQ9UBS9 1254 aaKnown RBP11.97□□□□□ -0.49
SEC16A-207ENST00000453963 TIMM22Q9Y584 194 aa11.97□□□□□ -0.49
SEC16A-207ENST00000453963 GPC6Q9Y625 555 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms