RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 MAZP56270 477 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 CCZ1BP86790 482 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 CCZ1P86791 482 aaPredicted RBP13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 SQSTM1Q13501 440 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 OLIG2Q13516 323 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 KHDC1Q4VXA5 237 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ZNF648Q5T619 568 aaPredicted RBP13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ALS2CLQ60I27 953 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 KCTD11Q693B1 232 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ITPRIPL1Q6GPH6 555 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 SLC30A9Q6PML9 568 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 IGF2-ASQ6U949 168 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 SPRED1Q7Z699 444 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ADGRG6Q86SQ4 1221 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 TTC13Q8NBP0 860 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ZDHHC1Q8WTX9 485 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 GLYATL1Q969I3 302 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ATXN7L3BQ96GX2 97 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 CARD9Q9H257 536 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 POLR1BQ9H9Y6 1135 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 BPIFA1Q9NP55 256 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ARFGAP3Q9NP61 516 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 HACD3Q9P035 362 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ZNHIT2Q9UHR6 403 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 AK5Q9Y6K8 562 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 CACNA1GO43497 2377 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 GOLGA6L6A8MZA4 724 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 KRT86O43790 486 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 BRINP1O60477 761 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 SLC25A14O95258 325 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 METTL18O95568 372 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 MPOP05164 745 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 RPLP0P05388 317 aaKnown RBP13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 PSMB4P28070 264 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 ACTR1BP42025 376 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 CLCNKAP51800 687 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 ACTR1AP61163 376 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 ZFP36L1Q07352 338 aaKnown RBP13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 PTPRCAPQ14761 206 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 ATP13A5Q4VNC0 1218 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 MEI1Q5TIA1 1274 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 TMPRSS9Q7Z410 1059 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 B3GNT8Q7Z7M8 397 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 GALNT13Q8IUC8 556 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 CCNJLQ8IV13 435 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 ZNF547Q8IVP9 402 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 Q8N9G6 341 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 CCDC112Q8NEF3 446 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 RTP4Q96DX8 246 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 VPS35Q96QK1 796 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 TSGA10Q9BZW7 698 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 OR2AG1Q9H205 316 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 ASCL3Q9NQ33 180 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 SLC23A2Q9UGH3 650 aa13.92□□□□□ -0.18
RTFDC1-204ENST00000449062 PMS2P1A4D2B8 440 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 GPR89AB7ZAQ6 455 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 D6RAR5 112 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 GRID2O43424 1007 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 BUD23O43709 281 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 UGT1A9O60656 530 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 ZNF189O75820 626 aaPredicted RBP13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 GPR89BP0CG08 455 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 UGT1A6P19224 532 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 UGT1A1P22309 533 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 UGT1A4P22310 534 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 CD1CP29017 333 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 UGT1A3P35503 534 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 UGT1A5P35504 534 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 GDF10P55107 478 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 OR1D5P58170 312 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 SPIDRQ14159 915 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 PARP6Q2NL67 630 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 ZNF569Q5MCW4 686 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 IYDQ6PHW0 289 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 ZNF574Q6ZN55 896 aaPredicted RBP13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 CHST15Q7LFX5 561 aaPredicted RBP13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 C11orf96Q7Z7L8 435 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 SFRP1Q8N474 314 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 FAM71DQ8N9W8 422 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 SNIP1Q8TAD8 396 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 BLOC1S5Q8TDH9 187 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 FGF11Q92914 225 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 SLC46A1Q96NT5 459 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 GFM1Q96RP9 751 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 APOL2Q9BQE5 337 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 FERMT1Q9BQL6 677 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 FICDQ9BVA6 458 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 UGT1A7Q9HAW7 530 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 UGT1A10Q9HAW8 530 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 UGT1A8Q9HAW9 530 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 TBC1D29Q9UFV1 150 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 AAR2Q9Y312 384 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 KCTD3Q9Y597 815 aa13.91□□□□□ -0.18
RTFDC1-204ENST00000449062 GOLGA6L9A6NEM1 432 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 VEGFDO43915 354 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 PPFIA2O75334 1257 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 CCKBRP32239 447 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 EIF2S3P41091 472 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 GPR3P46089 330 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms