RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 GABPB2Q8TAK5 448 aaPredicted RBP13.98□□□□□ -0.17
SSBP3-208ENST00000444533 COX14Q96I36 57 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 GSDMCQ9BYG8 508 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 NCKIPSDQ9NZQ3 722 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 ZNHIT2Q9UHR6 403 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 SLC17A4Q9Y2C5 497 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 TMEM98Q9Y2Y6 226 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 GPSM3Q9Y4H4 160 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 KCTD3Q9Y597 815 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 ADAMTS9Q9P2N4 1935 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 CCDC78A2IDD5 438 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 H7C0S8 307 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 CDK14O94921 469 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 CEACAM5P06731 702 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 VCLP18206 1134 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 CACNG1Q06432 222 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 BNIP3Q12983 259 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 MSLNQ13421 630 aaPredicted RBP13.97□□□□□ -0.17
SSBP3-208ENST00000444533 LRP8Q14114 963 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 PUM1Q14671 1186 aaKnown RBP eCLIP13.97□□□□□ -0.17
SSBP3-208ENST00000444533 PTPRCAPQ14761 206 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 AARS2Q5JTZ9 985 aaKnown RBP13.97□□□□□ -0.17
SSBP3-208ENST00000444533 RNASEH2BQ5TBB1 312 aaKnown RBP13.97□□□□□ -0.17
SSBP3-208ENST00000444533 LYPLAL1Q5VWZ2 237 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 ANKRD22Q5VYY1 191 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 TAF8Q7Z7C8 310 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 TRIM74Q86UV6 250 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 GATAD2AQ86YP4 633 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 OTUD6BQ8N6M0 293 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 NAT8LQ8N9F0 302 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 ZNF548Q8NEK5 533 aaPredicted RBP13.97□□□□□ -0.17
SSBP3-208ENST00000444533 SAP25Q8TEE9 199 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 OR1E3Q8WZA6 343 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 PDXPQ96GD0 296 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 CDKN2AIPNLQ96HQ2 116 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 ZNF514Q96K75 400 aaPredicted RBP13.97□□□□□ -0.17
SSBP3-208ENST00000444533 SERPINB12Q96P63 405 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 OR2M4Q96R27 311 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 ERP44Q9BS26 406 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 TRIM51Q9BSJ1 452 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 OR2AG1Q9H205 316 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 MRM3Q9HC36 420 aaKnown RBP13.97□□□□□ -0.17
SSBP3-208ENST00000444533 FGF22Q9HCT0 170 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 SMOXQ9NWM0 555 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 TRNAU1APQ9NX07 287 aaKnown RBP13.97□□□□□ -0.17
SSBP3-208ENST00000444533 NLGN3Q9NZ94 848 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 FTSJ1Q9UET6 329 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 SUFUQ9UMX1 484 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 MAD1L1Q9Y6D9 718 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 FRYLO94915 3013 aa13.97□□□□□ -0.17
SSBP3-208ENST00000444533 TCRBV7S3A2A0A539 114 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 SCAMP1O15126 338 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 FFAR2O15552 330 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 UGT1A9O60656 530 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 UGT1A6P19224 532 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 UGT1A1P22309 533 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 UGT1A4P22310 534 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 UGT1A3P35503 534 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 UGT1A5P35504 534 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 RPIAP49247 311 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 ARL4CP56559 192 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 CAV1Q03135 178 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 FASTKD1Q53R41 847 aaKnown RBP13.96□□□□□ -0.17
SSBP3-208ENST00000444533 TPRG1LQ5T0D9 272 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 LVRNQ6Q4G3 990 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 CERS6Q6ZMG9 384 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 TRAPPC5Q8IUR0 188 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 RBFAQ8N0V3 343 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 EID2Q8N6I1 236 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 DDHD1Q8NEL9 900 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 COPS8Q99627 209 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 NAT9Q9BTE0 207 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 VPS37BQ9H9H4 285 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 UGT1A7Q9HAW7 530 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 UGT1A10Q9HAW8 530 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 UGT1A8Q9HAW9 530 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 MRPL40Q9NQ50 206 aaKnown RBP13.96□□□□□ -0.17
SSBP3-208ENST00000444533 CHRAC1Q9NRG0 131 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 SYBUQ9NX95 663 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 GVINP1Q7Z2Y8 2422 aa13.96□□□□□ -0.17
SSBP3-208ENST00000444533 LMO7DNF2Z398 122 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 TPP1O14773 563 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 KMOO15229 486 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 GRID2O43424 1007 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 RAD51CO43502 376 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 SH3BP5O60239 455 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 TMEM63AO94886 807 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 SEC31AO94979 1220 aaKnown RBP13.95□□□□□ -0.18
SSBP3-208ENST00000444533 LDOC1O95751 146 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-208ENST00000444533 POLBP06746 335 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 CD59P13987 128 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 CSRP1P21291 193 aaKnown RBP13.95□□□□□ -0.18
SSBP3-208ENST00000444533 PMLP29590 882 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 ID4P47928 161 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 POLD2P49005 469 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 DUSP3P51452 185 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-208ENST00000444533 ITGA8P53708 1063 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 CRADDP78560 199 aa13.95□□□□□ -0.18
SSBP3-208ENST00000444533 TMEM115Q12893 351 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-208ENST00000444533 BIRC2Q13490 618 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms