RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 ARL14Q8N4G2 192 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 RNF10Q8N5U6 811 aaKnown RBP16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 CCDC110Q8TBZ0 833 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 GLYATL1Q969I3 302 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 OXNAD1Q96HP4 312 aaPredicted RBP16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 MRGPRX2Q96LB1 330 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 APOL2Q9BQE5 337 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 RABGEF1Q9UJ41 708 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 ATXN7L1Q9ULK2 861 aaPredicted RBP16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 SPO11Q9Y5K1 396 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 ENTPD2Q9Y5L3 495 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 OAS3Q9Y6K5 1087 aaKnown RBP16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 CAPN6Q9Y6Q1 641 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 ASPMQ8IZT6 3477 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 A0A0U1RQJ8 604 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 C2orf81A6NN90 581 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 STX7O15400 261 aaKnown RBP16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 BUD23O43709 281 aaKnown RBP16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 CCDC175P0C221 793 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 JMJD7P0C870 316 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 BPIP17213 487 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 MAPK9P45984 424 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 LMAN1P49257 510 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 PCBP4P57723 403 aaKnown RBP16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 TBC1D25Q3MII6 688 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 OGFOD3Q6PK18 319 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 FAM151BQ6UXP7 276 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 SPRED1Q7Z699 444 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 NRROSQ86YC3 692 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 TRAPPC5Q8IUR0 188 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 TRIM48Q8IWZ4 208 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 WDR36Q8NI36 951 aaKnown RBP16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 PATE1Q8WXA2 126 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 FGF11Q92914 225 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 TADA1Q96BN2 335 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 SPATA13Q96N96 652 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 SLC38A3Q99624 504 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 HERPUD2Q9BSE4 406 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 ZCCHC2Q9C0B9 1178 aaKnown RBP16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 CARD9Q9H257 536 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 LZTFL1Q9NQ48 299 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 KCNK4Q9NYG8 393 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 APPL1Q9UKG1 709 aa16.6■□□□□ 0.25
TSPAN9-204ENST00000444315 KMT2BQ9UMN6 2715 aaPredicted RBP16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 SCN8AQ9UQD0 1980 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 GLYATL1P3A0A0U1RQE8 302 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 LOC285095A0A1B0GVY8 99 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 PDZK1P1A8MUH7 402 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 AURKAO14965 403 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 MTX2O75431 263 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 AGTP01019 485 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 EPOP01588 193 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 FUCA1P04066 466 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 PNLIPP16233 465 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 VCLP18206 1134 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 AKT1P31749 480 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 LSSP48449 732 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 OR1D5P58170 312 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 COL28A1Q2UY09 1125 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 BROXQ5VW32 411 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 PIM3Q86V86 326 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 LRRTM4Q86VH4 590 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 FBXO39Q8N4B4 442 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 TAB3Q8N5C8 712 aaPredicted RBP16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 ZNF578Q96N58 590 aaPredicted RBP16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 PLEKHG4BQ96PX9 1271 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 WDR24Q96S15 920 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 TRIM39Q9HCM9 518 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 KLC4Q9NSK0 619 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 ATXN10Q9UBB4 475 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 DNAJC16Q9Y2G8 782 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 ADGRG1Q9Y653 693 aa16.59■□□□□ 0.25
TSPAN9-204ENST00000444315 UNC13CQ8NB66 2214 aa16.58■□□□□ 0.25
TSPAN9-204ENST00000444315 NUAK1O60285 661 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 CDK14O94921 469 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 TNFSF15O95150 251 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 ZNF8P17098 575 aaPredicted RBP16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 NFATC2Q13469 925 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 ITGA9Q13797 1035 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 SEPT6Q14141 434 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 RPS6KA1Q15418 735 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 SEPT7Q16181 437 aaKnown RBP16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 RAB11FIP2Q7L804 512 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 SLC9B2Q86UD5 537 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 FAM71DQ8N9W8 422 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 ZNF248Q8NDW4 579 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 TBL1YQ9BQ87 522 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 PISDQ9UG56 409 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 CNOT6Q9ULM6 557 aaKnown RBP16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 APC2O95996 2303 aa16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 ANKRD11Q6UB99 2663 aaPredicted RBP16.58■□□□□ 0.24
TSPAN9-204ENST00000444315 URB1O60287 2271 aaKnown RBP16.57■□□□□ 0.24
TSPAN9-204ENST00000444315 A0A1W2PQM1 296 aa16.57■□□□□ 0.24
TSPAN9-204ENST00000444315 GPR89AB7ZAQ6 455 aa16.57■□□□□ 0.24
TSPAN9-204ENST00000444315 NTN3O00634 580 aaPredicted RBP16.57■□□□□ 0.24
TSPAN9-204ENST00000444315 KMOO15229 486 aa16.57■□□□□ 0.24
TSPAN9-204ENST00000444315 CASC3O15234 703 aaKnown RBP16.57■□□□□ 0.24
TSPAN9-204ENST00000444315 DDX3YO15523 660 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms