RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 KCNK6Q9Y257 313 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 ADGRG1Q9Y653 693 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 PIPSLA2A3N6 862 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 TMEM191CA6NGB0 347 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 INPP4BO15327 924 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 DESP17661 470 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 XRCC1P18887 633 aaPredicted RBP14.22□□□□□ -0.13
HMGN1-208ENST00000443046 PSMA2P25787 234 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 MIPP30301 263 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 DNASE1L3Q13609 305 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 LAMB3Q13751 1172 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 NADK2Q4G0N4 442 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 ZNF787Q6DD87 383 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 PLEKHA7Q6IQ23 1121 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 PRSS42Q7Z5A4 293 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 TICAM1Q8IUC6 712 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 TEX26Q8N6G2 289 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 KLHL6Q8WZ60 621 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 RNF31Q96EP0 1072 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 STAMBPL1Q96FJ0 436 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 PLEKHG4BQ96PX9 1271 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 LHX9Q9NQ69 397 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 ETNK2Q9NVF9 386 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 PCDHGA9Q9Y5G4 932 aaKnown RBP14.22□□□□□ -0.13
HMGN1-208ENST00000443046 SLC30A1Q9Y6M5 507 aa14.22□□□□□ -0.13
HMGN1-208ENST00000443046 CELSR1Q9NYQ6 3014 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 C21orf140B9A014 251 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 NUAK1O60285 661 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 SPAG6O75602 509 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 ASMTLO95671 621 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 MT-ND3P03897 115 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 CCNYL3P0C7X3 344 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 ACP5P13686 325 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 DCTP40126 519 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 MMP13P45452 471 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 UBE2HP62256 183 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 CT47A1Q5JQC4 288 aaPredicted RBP14.21□□□□□ -0.13
HMGN1-208ENST00000443046 CDKAL1Q5VV42 579 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 TMEM26Q6ZUK4 368 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 RASGRP3Q8IV61 690 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 NDUFAF2Q8N183 169 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 BBS5Q8N3I7 341 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 AOPEPQ8N6M6 819 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 CT55Q8WUE5 264 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 LYSMD1Q96S90 227 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 SYT11Q9BT88 431 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 BRD8Q9H0E9 1235 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 IGSF5Q9NSI5 407 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 PARVAQ9NVD7 372 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 TAS2R14Q9NYV8 317 aa14.21□□□□□ -0.13
HMGN1-208ENST00000443046 SCHIP1Q9P0W5 487 aaPredicted RBP14.21□□□□□ -0.13
HMGN1-208ENST00000443046 RCOR3Q9P2K3 495 aaPredicted RBP14.21□□□□□ -0.13
HMGN1-208ENST00000443046 AKAP9Q99996 3911 aa14.21□□□□□ -0.14
HMGN1-208ENST00000443046 A1L4Q6 167 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 FADS2P1A8MWK0 482 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 TCP11X1B4DZS4 312 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 KIF1CO43896 1103 aaKnown RBP14.2□□□□□ -0.14
HMGN1-208ENST00000443046 PRPSAP2O60256 369 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 SNX2O60749 519 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 LRCH4O75427 683 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 UBXN7O94888 489 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 CLDN7O95471 211 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 CLDN1O95832 211 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 PRLP01236 227 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 COL8A1P27658 744 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 LEPRP48357 1165 aaKnown RBP14.2□□□□□ -0.14
HMGN1-208ENST00000443046 SEPHS1P49903 392 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 CDH6P55285 790 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 KRT31Q15323 416 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 SYCP1Q15431 976 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 INPP5JQ15735 1006 aaPredicted RBP14.2□□□□□ -0.14
HMGN1-208ENST00000443046 DPYSL2Q16555 572 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 UGT8Q16880 541 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 HENMT1Q5T8I9 393 aaKnown RBP14.2□□□□□ -0.14
HMGN1-208ENST00000443046 MARC1Q5VT66 337 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 ALG1LQ6GMV1 187 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 MAMDC2Q7Z304 686 aaPredicted RBP14.2□□□□□ -0.14
HMGN1-208ENST00000443046 POLNQ7Z5Q5 900 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 THAP4Q8WY91 577 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 SEC14L1Q92503 715 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 TGM7Q96PF1 710 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 GPR87Q9BY21 358 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 TRIM7Q9C029 511 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 CARD9Q9H257 536 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 ACTL8Q9H568 366 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 ZWILCHQ9H900 591 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 AKIRIN1Q9H9L7 192 aaPredicted RBP14.2□□□□□ -0.14
HMGN1-208ENST00000443046 SEPT11Q9NVA2 429 aaKnown RBP14.2□□□□□ -0.14
HMGN1-208ENST00000443046 SEMA5BQ9P283 1151 aa14.2□□□□□ -0.14
HMGN1-208ENST00000443046 ZNF624Q9P2J8 865 aaPredicted RBP14.2□□□□□ -0.14
HMGN1-208ENST00000443046 GRID2O43424 1007 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 CEACAM4O75871 244 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 TIAF1O95411 115 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 ATP1A3P13637 1013 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 TYRP1P17643 537 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 AMPD1P23109 780 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 CASP14P31944 242 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 SLC19A1P41440 591 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 PGDP52209 483 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 EIF2S3LQ2VIR3 472 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms