RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 WDR48Q8TAF3 677 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 ATG4AQ8WYN0 398 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 PLEKHG4BQ96PX9 1271 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 RMI1Q9H9A7 625 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 TRIM39Q9HCM9 518 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 IL17CQ9P0M4 197 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 ATXN7L1Q9ULK2 861 aaPredicted RBP13.6□□□□□ -0.23
LTBR-202ENST00000440421 KCNK6Q9Y257 313 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 ARHGEF17Q96PE2 2063 aaPredicted RBP13.6□□□□□ -0.23
LTBR-202ENST00000440421 C5orf60A6NFR6 353 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 RHPN2P1A8MT19 583 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 D6RAR5 112 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 GRID2O43424 1007 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 NUAK1O60285 661 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 EML2O95834 649 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 ALDH4A1P30038 563 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 ADRA1AP35348 466 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 SPAM1P38567 509 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 PDX1P52945 283 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 GDF10P55107 478 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 PEX6Q13608 980 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 RPS6KA1Q15418 735 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 PLA2G4EQ3MJ16 856 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 ATP13A5Q4VNC0 1218 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 KHDC1Q4VXA5 237 aaKnown RBP13.59□□□□□ -0.23
LTBR-202ENST00000440421 MEI1Q5TIA1 1274 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 PDPK2PQ6A1A2 396 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 FOXR1Q6PIV2 292 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 FAM151BQ6UXP7 276 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 RANBP10Q6VN20 620 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 SPRED1Q7Z699 444 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 B3GNT8Q7Z7M8 397 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 C17orf82Q86X59 251 aaPredicted RBP13.59□□□□□ -0.23
LTBR-202ENST00000440421 GDAP1Q8TB36 358 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 SLC35B2Q8TB61 432 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 DCBLD2Q96PD2 775 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 ALS2CR12Q96Q35 445 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 TBL1YQ9BQ87 522 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 TMEM121Q9BTD3 319 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 FOXP3Q9BZS1 431 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 CARD9Q9H257 536 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 GRPEL1Q9HAV7 217 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 IL26Q9NPH9 171 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 APPL1Q9UKG1 709 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 TMPRSS11EQ9UL52 423 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 SATB2Q9UPW6 733 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 PKP3Q9Y446 797 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 ARL5AQ9Y689 179 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 CACNA1BQ00975 2339 aa13.59□□□□□ -0.23
LTBR-202ENST00000440421 GLYATL1P3A0A0U1RQE8 302 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 A0A1W2PNU3 283 aaPredicted RBP13.58□□□□□ -0.24
LTBR-202ENST00000440421 PMS2P1A4D2B8 440 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 AGRPO00253 132 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 STX7O15400 261 aaKnown RBP13.58□□□□□ -0.24
LTBR-202ENST00000440421 GPR39O43194 453 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 TLX3O43711 291 aaPredicted RBP13.58□□□□□ -0.24
LTBR-202ENST00000440421 NRDCO43847 1150 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 UGT1A9O60656 530 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 SNX2O60749 519 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 ZNF189O75820 626 aaPredicted RBP13.58□□□□□ -0.24
LTBR-202ENST00000440421 METTL18O95568 372 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 PNLIPP16233 465 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 UGT1A6P19224 532 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 UGT1A1P22309 533 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 UGT1A4P22310 534 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 UGT1A3P35503 534 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 UGT1A5P35504 534 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 OR1D5P58170 312 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 B4GALNT1Q00973 533 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 CHRNA6Q15825 494 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 PARP6Q2NL67 630 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 AMZ1Q400G9 498 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 C19orf48Q6RUI8 117 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 SLC13A5Q86YT5 568 aaPredicted RBP13.58□□□□□ -0.24
LTBR-202ENST00000440421 POLR1BQ9H9Y6 1135 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 UGT1A7Q9HAW7 530 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 UGT1A10Q9HAW8 530 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 UGT1A8Q9HAW9 530 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 EPB41L5Q9HCM4 733 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 TBC1D29Q9UFV1 150 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 KCTD3Q9Y597 815 aa13.58□□□□□ -0.24
LTBR-202ENST00000440421 C2orf81A6NN90 581 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 PPM1DO15297 605 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 B4GAT1O43505 415 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 CDK14O94921 469 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 ACTN2P35609 894 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 LSSP48449 732 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 INHBCP55103 352 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 SNX1Q13596 522 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 TAF1AQ15573 450 aaPredicted RBP13.57□□□□□ -0.24
LTBR-202ENST00000440421 INSCQ1MX18 579 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 MAP9Q49MG5 647 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 ZDHHC20Q5W0Z9 365 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 ZNF662Q6ZS27 426 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 USP53Q70EK8 1073 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 ZNF438Q7Z4V0 828 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 ZNF761Q86XN6 746 aaPredicted RBP13.57□□□□□ -0.24
LTBR-202ENST00000440421 SLC37A2Q8TED4 501 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 HNRNPLLQ8WVV9 542 aaKnown RBP13.57□□□□□ -0.24
LTBR-202ENST00000440421 C1orf54Q8WWF1 131 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms