RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 COMTD1Q86VU5 262 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 ERO1BQ86YB8 467 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 GLB1L2Q8IW92 636 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 ARHGEF19Q8IW93 802 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 ABRAQ8N0Z2 381 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 LILRA3Q8N6C8 439 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 FSIP1Q8NA03 581 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 AKR7LQ8NHP1 331 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 RNASE8Q8TDE3 154 aaKnown RBP3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 ACTRT2Q8TDY3 377 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 RAPGEF4Q8WZA2 1011 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 SMG7Q92540 1137 aaKnown RBP3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 PTERQ96BW5 349 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 EFHD2Q96C19 240 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 GRAMD1AQ96CP6 724 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 KLHL29Q96CT2 875 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 NECTIN4Q96NY8 510 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 PSKH2Q96QS6 385 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 DCLRE1CQ96SD1 692 aaKnown RBP3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 MAP7D2Q96T17 732 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 ZBTB18Q99592 522 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 TPPP3Q9BW30 176 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 PINK1Q9BXM7 581 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 MRPL37Q9BZE1 423 aaKnown RBP3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 LSG1Q9H089 658 aaKnown RBP3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 TMEM117Q9H0C3 514 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 NSRP1Q9H0G5 558 aaKnown RBP3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 LDAHQ9H6V9 325 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 MVB12BQ9H7P6 319 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 ECT2Q9H8V3 914 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 KCNK13Q9HB14 408 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 TMEM165Q9HC07 324 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 TUFT1Q9NNX1 390 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 AGPAT3Q9NRZ7 376 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 TMLHEQ9NVH6 421 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 SIDT1Q9NXL6 827 aaKnown RBP3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 DONSONQ9NYP3 566 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 GPRC5DQ9NZD1 345 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 CFAP97Q9P2B7 532 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 KLHL9Q9P2J3 617 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 HDAC6Q9UBN7 1215 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 TRMT6Q9UJA5 497 aaKnown RBP3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 GMEB2Q9UKD1 530 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 CDYLQ9Y232 598 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 PLEKHA6Q9Y2H5 1048 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 MRPS2Q9Y399 296 aaKnown RBP3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 PCDHA10Q9Y5I2 948 aa3.64□□□□□ -1.83
HMGB1P12-201ENST00000438594 A0A0A6YYC8 382 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 FAM230AA0A1W2PPH8 454 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 A6NL46 340 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 RSPH10B2B2RC85 870 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 EIF3CLB5ME19 914 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 HSBP1L1C9JCN9 74 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 PROB1E7EW31 1015 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 H0Y8G0 127 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 I3L1I5 382 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 NRP1O14786 923 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SLC16A3O15427 465 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CLDN3O15551 220 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 LIASO43766 372 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 PRSS23O95084 383 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CHEK2O96017 543 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 IGHEP01854 428 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 IVLP07476 585 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 GRPP07492 148 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CYP3A4P08684 503 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 RSPH10BP0C881 870 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 HSPA8P11142 646 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ACP5P13686 325 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CD19P15391 556 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ADRA2CP18825 462 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CPN2P22792 545 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ACP1P24666 158 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ECHS1P30084 290 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 NF2P35240 595 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SOAT1P35610 550 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 HNF1BP35680 557 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CPOXP36551 454 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 GABRB2P47870 512 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 PTDSS1P48651 473 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 PNLIPRP2P54317 469 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CTXN1P60606 82 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ACTR3P61158 418 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CSNK2BP67870 215 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 NOP14P78316 857 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 NUCB2P80303 420 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SARNPP82979 210 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 GAD2Q05329 585 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 NIPAL4Q0D2K0 466 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 FOXI1Q12951 378 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SNTB2Q13425 540 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 MTM1Q13496 603 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CUL1Q13616 776 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 VEPH1Q14D04 833 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 RCN1Q15293 331 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 MST1LQ2TV78 715 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 PCGF3Q3KNV8 242 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 NADK2Q4G0N4 442 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 EPC2Q52LR7 807 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 TAF1BQ53T94 588 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms