RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 GIMAP2Q9UG22 337 aa6.21□□□□□ -1.42
ECHDC1-208ENST00000436638 SLCO3A1Q9UIG8 710 aa6.21□□□□□ -1.42
ECHDC1-208ENST00000436638 MMP17Q9ULZ9 603 aa6.21□□□□□ -1.42
ECHDC1-208ENST00000436638 SNX12Q9UMY4 172 aa6.21□□□□□ -1.42
ECHDC1-208ENST00000436638 HS3ST2Q9Y278 367 aa6.21□□□□□ -1.42
ECHDC1-208ENST00000436638 SNX8Q9Y5X2 465 aa6.21□□□□□ -1.42
ECHDC1-208ENST00000436638 SAR1BQ9Y6B6 198 aa6.21□□□□□ -1.42
ECHDC1-208ENST00000436638 COL4A2P08572 1712 aa6.21□□□□□ -1.42
ECHDC1-208ENST00000436638 MYOFQ9NZM1 2061 aa6.21□□□□□ -1.42
ECHDC1-208ENST00000436638 TCRBV21S2A2A0A5A6 115 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 FAM86C2PA6NEL3 165 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 GOLGA6L10A6NI86 522 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 SHISA7A6NL88 538 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 A8MVJ9 347 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 TTC34A8MYJ7 566 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 PRR33A8MZF0 331 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 WASH3PC4AMC7 463 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 C1QTNF3-AMACRE9PGA6 284 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 SGK1O00141 431 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 PGRMC1O00264 195 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 CES2O00748 559 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 MATN3O15232 486 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 PI15O43692 258 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 MAFKO60675 156 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 ZMPSTE24O75844 475 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 URI1O94763 535 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 TMCC1O94876 653 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 GSRP00390 522 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 ACADMP11310 421 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 SRCP12931 536 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 HLA-EP13747 358 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 PRKCHP24723 683 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 AVPR2P30518 371 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 HOXC12P31275 282 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 PRKAR1BP31321 381 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 HSPA9P38646 679 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 MMP13P45452 471 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 CLCN2P51788 898 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 DGKEP52429 567 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 C21orf58P58505 322 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 NFKB2Q00653 900 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 RUNX1T1Q06455 604 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 ZNF33AQ06730 810 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 SLC10A2Q12908 348 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 HNRNPDQ14103 355 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 SLC9A5Q14940 896 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 NOMO1Q15155 1222 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 CRY1Q16526 586 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 WSCD2Q2TBF2 565 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 HNRNPA1L2Q32P51 320 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 BBS9Q3SYG4 887 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 SMUG1Q53HV7 270 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 SLC45A4Q5BKX6 768 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 CARD16Q5EG05 197 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 FAM46CQ5VWP2 391 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 PAPD7Q5XG87 772 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 KIAA1324Q6UXG2 1013 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 ARHGAP36Q6ZRI8 547 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 SYT13Q7L8C5 426 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 PID1Q7Z2X4 250 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 HID1Q8IV36 788 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 TP53INP2Q8IXH6 220 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 NKAPQ8N5F7 415 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 ZNF366Q8N895 744 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 BBOF1Q8ND07 529 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 ZNF540Q8NDQ6 660 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 TSTD1Q8NFU3 115 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 OR2T3Q8NH03 318 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 KIF18AQ8NI77 898 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 GANCQ8TET4 914 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 OR8D1Q8WZ84 308 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 ISG20Q96AZ6 181 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 ERLEC1Q96DZ1 483 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 CNDP1Q96KN2 507 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 CAPZA3Q96KX2 299 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 MRGPRX3Q96LB0 322 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 GDAP1L1Q96MZ0 367 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 WDR24Q96S15 920 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 ACOX2Q99424 681 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 VAT1Q99536 393 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 GABRG3Q99928 467 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 TM6SF2Q9BZW4 377 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 TNKS2Q9H2K2 1166 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 TMEM245Q9H330 911 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 PDFQ9HBH1 243 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 DYRK4Q9NR20 520 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 RBM22Q9NW64 420 aaKnown RBP eCLIP6.2□□□□□ -1.427e-6■■■■□ 24.6
ECHDC1-208ENST00000436638 HPF1Q9NWY4 346 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 KLHL8Q9P2G9 620 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 NFKBIL1Q9UBC1 381 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 SAE1Q9UBE0 346 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 RNF14Q9UBS8 474 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 GGT7Q9UJ14 662 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 ZNF148Q9UQR1 794 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 ACTL7AQ9Y615 435 aa6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 OAS3Q9Y6K5 1087 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-208ENST00000436638 MIA3Q5JRA6 1907 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 VSTM5A8MXK1 200 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 K7ERQ8 282 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 PDLIM1O00151 329 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms