RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 A0A1W2PQJ5 194 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 A8MU76 341 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 B4E171 279 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 KIR2DS3K7RE56 304 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 MATN3O15232 486 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 PPM1DO15297 605 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 RAD1O60671 282 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 ATP1A1P05023 1023 aaKnown RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 CYP1A2P05177 515 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 PDHA1P08559 390 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 THRAP10827 490 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 FGF3P11487 239 aaPredicted RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 CSF2RBP32927 897 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 UGT1A3P35503 534 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 TSPAN7P41732 249 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 CCR10P46092 362 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 FASLGP48023 281 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 CYP4F2P78329 520 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 ZBED6P86452 979 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 SLC25A11Q02978 314 aaKnown RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 GALNT2Q10471 571 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 KIR2DS5Q14953 304 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 PDK2Q15119 407 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 PYCR3Q53H96 274 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 CCDC70Q6NSX1 233 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 TMEM71Q6P5X7 295 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 ALKBH5Q6P6C2 394 aaKnown RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 CEACAM20Q6UY09 585 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 CHST15Q7LFX5 561 aaPredicted RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 TECPR1Q7Z6L1 1165 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 SLC9B2Q86UD5 537 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 DTX1Q86Y01 620 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 SFRP1Q8N474 314 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 EXD3Q8N9H8 876 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 CPLX3Q8WVH0 158 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 NCSTNQ92542 709 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 NKD1Q969G9 470 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 SCARF2Q96GP6 870 aaPredicted RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 BTBD6Q96KE9 485 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 NSMCE3Q96MG7 304 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 NAP1L5Q96NT1 182 aaPredicted RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 CATSPER2Q96P56 530 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 ZPBPQ9BS86 351 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 SPATA16Q9BXB7 569 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 TDRD1Q9BXT4 1180 aaKnown RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 ADNPQ9H2P0 1102 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 DEF6Q9H4E7 631 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 FAM83DQ9H4H8 585 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 ZFAND3Q9H8U3 227 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 RMI1Q9H9A7 625 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 PCDH9Q9HC56 1237 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 SARS2Q9NP81 518 aaKnown RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 RAD18Q9NS91 495 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 STARD5Q9NSY2 213 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 GEMIN8Q9NWZ8 242 aaKnown RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 TMEM63CQ9P1W3 806 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 MAP10Q9P2G4 905 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 KCNK6Q9Y257 313 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 PRKAB1Q9Y478 270 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 B3GALT1Q9Y5Z6 326 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 NBASA2RRP1 2371 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 A0A0U1RQS6 177 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 LRRD1A4D1F6 860 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 RGSL1A5PLK6 1076 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 OR5K4A6NMS3 321 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 PDZK1P1A8MUH7 402 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 ARHGAP6O43182 974 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 PROSCO94903 275 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 CLDN7O95471 211 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 FUCA1P04066 466 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 TPM1P09493 284 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 PRKAR1AP10644 381 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 LIFP15018 202 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 VCLP18206 1134 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 CCNCP24863 283 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 MAP4P27816 1152 aaKnown RBP7.68□□□□□ -1.18
VPS50-203ENST00000436177 CD86P42081 329 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 EPHA4P54764 986 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 POLE2P56282 527 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 UBASH3AP57075 661 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 FANCCQ00597 558 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 NFKB2Q00653 900 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 MC1RQ01726 317 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 PTSQ03393 145 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 KCNAB2Q13303 367 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 SQSTM1Q13501 440 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 SEPT6Q14141 434 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 DPYSL3Q14195 570 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 PAFAH1B3Q15102 231 aaKnown RBP7.68□□□□□ -1.18
VPS50-203ENST00000436177 PTPRRQ15256 657 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 INSCQ1MX18 579 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 LINC00303Q3SY05 128 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 ANKS6Q68DC2 871 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 NCBP2-AS2Q69YL0 99 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 TXNRD3NBQ6F5E7 133 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 ALG1LQ6GMV1 187 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 WDR74Q6RFH5 385 aaPredicted RBP7.68□□□□□ -1.18
VPS50-203ENST00000436177 ZNF574Q6ZN55 896 aaPredicted RBP7.68□□□□□ -1.18
VPS50-203ENST00000436177 RFLNAQ6ZTI6 216 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms