RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 INTS8Q75QN2 995 aaKnown RBP4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 CTU1Q7Z7A3 348 aaKnown RBP4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 SLFN11Q7Z7L1 901 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 GPR180Q86V85 440 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 OR14A16Q8NHC5 309 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 PPP4R1Q8TF05 950 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 PTPMT1Q8WUK0 201 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 IGFBPL1Q8WX77 278 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 LPGAT1Q92604 370 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 INPP5DQ92835 1189 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 APBB2Q92870 758 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 ATP6V1E2Q96A05 226 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 ORAI1Q96D31 301 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 TXNDC15Q96J42 360 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 SPAG5Q96R06 1193 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 KCNK15Q9H427 330 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 ESRP2Q9H6T0 727 aaKnown RBP4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 HACL1Q9UJ83 578 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 ANAPC5Q9UJX4 755 aa4.53□□□□□ -1.68
HMGB1P45-201ENST00000435986 LOC102723996A0A087X1L8 192 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 IGHV4-28A0A0C4DH34 117 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 A8MXE2 369 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 PSMA7O14818 248 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 ADAMDEC1O15204 470 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 WDR46O15213 610 aaKnown RBP4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 SLC16A5O15375 505 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 TSPAN1O60635 241 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 RSL1D1O76021 490 aaKnown RBP4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 HSPA4LO95757 839 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 CH25HO95992 272 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 ICAM1P05362 532 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 TUBBP07437 444 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 THPOP40225 353 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 MMP14P50281 582 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 PEX5P50542 639 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 CSE1LP55060 971 aaKnown RBP4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 CDC37Q16543 378 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 MEP1AQ16819 746 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 ARMC4Q5T2S8 1044 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 ANKRD54Q6NXT1 300 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 DUS1LQ6P1R4 473 aaKnown RBP4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 CASC1Q6TDU7 716 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 DLK2Q6UY11 383 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 Q6ZSV7 163 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 HAUS6Q7Z4H7 955 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 ZSCAN30Q86W11 494 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 SRRM1Q8IYB3 904 aaKnown RBP4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 EMC1Q8N766 993 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 TDRD5Q8NAT2 981 aaKnown RBP4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 ADAMTS14Q8WXS8 1223 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 HDAC11Q96DB2 347 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 CDRT15Q96T59 188 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 SEMA3CQ99985 751 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 ALDH8A1Q9H2A2 487 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 RAD21L1Q9H4I0 556 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 WSB2Q9NYS7 404 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 GDE1Q9NZC3 331 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 TSPYL4Q9UJ04 414 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 OSGIN1Q9UJX0 560 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 PADI1Q9ULC6 663 aa4.52□□□□□ -1.69
HMGB1P45-201ENST00000435986 MAGEB17A8MXT2 336 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 KCNN4O15554 427 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 ZBTB43O43298 467 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 TBX10O75333 385 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 SOX30O94993 753 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 FGF2P09038 288 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 NR2F2P24468 414 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 EIF2S3P41091 472 aaKnown RBP4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 RFX2P48378 723 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 AMTP48728 403 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 RAB28P51157 221 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 CCR3P51677 355 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 CLCNKAP51800 687 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 ZNF41P51814 821 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 ZNF75DP51815 510 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 SEC61BP60468 96 aaKnown RBP4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 ROR1Q01973 937 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 TFCP2Q12800 502 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 CTTNQ14247 550 aaKnown RBP4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 EIF2S3LQ2VIR3 472 aaKnown RBP4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 AMZ1Q400G9 498 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 CCDC92Q53HC0 331 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 HECTD3Q5T447 861 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 ARMC3Q5W041 872 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 THNSL1Q8IYQ7 743 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 NKAIN3Q8N8D7 197 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 WFIKKN2Q8TEU8 576 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 OIT3Q8WWZ8 545 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 TAAR8Q969N4 342 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 VPS33AQ96AX1 596 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 HMCESQ96FZ2 354 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 EGLN2Q96KS0 407 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 NEK1Q96PY6 1258 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 OR1F2PQ96R84 312 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 DDOQ99489 341 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 ADPGKQ9BRR6 497 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 HAUS8Q9BT25 410 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 ARGLU1Q9NWB6 273 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 PAG1Q9NWQ8 432 aa4.51□□□□□ -1.69
HMGB1P45-201ENST00000435986 CWC25Q9NXE8 425 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms