RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 GALK1P51570 392 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 VAMP2P63027 116 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 ADAM8P78325 824 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 MED22Q15528 200 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 POTEHQ6S545 545 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 GIPC3Q8TF64 312 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 TBC1D24Q9ULP9 559 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 PXDNLA1KZ92 1463 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 C1RP00736 705 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 SPATA31D3P0C874 917 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF20P17024 532 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 CD247P20963 164 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 TCEA1P23193 301 aaKnown RBP11.14□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF143P52747 638 aaPredicted RBP11.14□□□□□ -0.63
SCN4A-201ENST00000435607 MAPK12P53778 367 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCN4A-201ENST00000435607 SPATA31D4Q6ZUB0 917 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 TMEM156Q8N614 296 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 DNAAF1Q8NEP3 725 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 PIGXQ8TBF5 258 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF398Q8TD17 642 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 ACMSDQ8TDX5 336 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 SLC47A1Q96FL8 570 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 ART5Q96L15 291 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 HAPLN3Q96S86 360 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 ATXN10Q9UBB4 475 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 PCDHGB7Q9Y5F8 929 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 USP12O75317 370 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 AKAP3O75969 853 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 SEC24AO95486 1093 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 PRH1P02810 166 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 NR4A1P22736 598 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 FLT3LGP49771 235 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 SEC24CP53992 1094 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 TUSC3Q13454 348 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 HEPACAMQ14CZ8 416 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 SLC25A25Q6KCM7 469 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 CERS6Q6ZMG9 384 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 ABHD13Q7L211 337 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 KATNAL2Q8IYT4 538 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 BHLHE22Q8NFJ8 381 aaPredicted RBP11.14□□□□□ -0.63
SCN4A-201ENST00000435607 OR2L8Q8NGY9 312 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 CEMIPQ8WUJ3 1361 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 KCNJ9Q92806 393 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 UPF1Q92900 1129 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCN4A-201ENST00000435607 TBL1XR1Q9BZK7 514 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 RIOX1Q9H6W3 641 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 UGT2B11O75310 529 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 LRATO95237 230 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 PAPSS2O95340 614 aaPredicted RBP11.13□□□□□ -0.63
SCN4A-201ENST00000435607 POP4O95707 220 aaKnown RBP11.13□□□□□ -0.63
SCN4A-201ENST00000435607 ALDH4A1P30038 563 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 SOX10P56693 466 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 CAP1Q01518 475 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 C2orf80Q0P641 193 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 FAM35AQ86V20 835 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 REXO1L1PQ8IX06 675 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 NKD1Q969G9 470 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 RTFDC1Q9BY42 306 aaPredicted RBP11.13□□□□□ -0.63
SCN4A-201ENST00000435607 PCDH18Q9HCL0 1135 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 PCDHGB2Q9Y5G2 931 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 JMJD7P0C870 316 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 GRIA3P42263 894 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 CDK9P50750 372 aaKnown RBP11.13□□□□□ -0.63
SCN4A-201ENST00000435607 CEBPGP53567 150 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 PPP3CAQ08209 521 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 EOGTQ5NDL2 527 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 FNBP1LQ5T0N5 605 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 CATSPERGQ6ZRH7 1159 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 TTLQ8NG68 377 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 PSKH2Q96QS6 385 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 USB1Q9BQ65 265 aaKnown RBP11.13□□□□□ -0.63
SCN4A-201ENST00000435607 PFDN2Q9UHV9 154 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 PREX2Q70Z35 1606 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 C1orf167Q5SNV9 1468 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 CPED1A4D0V7 1026 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 M0R129 80 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 HSD17B2P37059 387 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 LRRC52Q8N7C0 313 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 COX18Q8N8Q8 333 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 DNAJB14Q8TBM8 379 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 XAGE5Q8WWM1 108 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 SAR1AQ9NR31 198 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 DNAJC28Q9NX36 388 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 GLI2P10070 1586 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 TM7SF2O76062 418 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 NDUFS1P28331 727 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 CDKL1Q00532 357 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 SLC34A1Q06495 639 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 MED27Q6P2C8 311 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 RAD9BQ6WBX8 426 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 OTOP3Q7RTS5 596 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 SPATA19Q7Z5L4 167 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 PLCZ1Q86YW0 608 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 WFIKKN2Q8TEU8 576 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 C12orf66Q96MD2 445 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.13□□□□□ -0.63
SCN4A-201ENST00000435607 ABCC3O15438 1527 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 C5orf60A6NFR6 353 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 CORO1AP31146 461 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms