RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 GTF2IRD1Q9UHL9 959 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 INVSQ9Y283 1065 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 NRXN2Q9P2S2 1712 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 WDR81Q562E7 1941 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 ILVBLA1L0T0 632 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 NCF1BA6NI72 391 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 NCF1CA8MVU1 366 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 AGRPO00253 132 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 TNPO2O14787 897 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 DAB1O75553 588 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 CNTN5O94779 1100 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 CST1P01037 141 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 KRT8P05787 483 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 NCF1P14598 390 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 HRH2P25021 359 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 GTF2E2P29084 291 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 FMO3P31513 532 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 COLEC12Q5KU26 742 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 HECTD2Q5U5R9 776 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 GALNT5Q7Z7M9 940 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 RBM23Q86U06 439 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 SYTL1Q8IYJ3 562 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 SIX5Q8N196 739 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 HDAC2Q92769 488 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 SPATA33Q96N06 139 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 TBC1D14Q9P2M4 693 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 POLG2Q9UHN1 485 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 RGPD3A6NKT7 1758 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 RGPD4Q7Z3J3 1758 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 I6L893 689 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 UBXN8O00124 270 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 ARIH2O95376 493 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 UMPSP11172 480 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 CDH1P12830 882 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 CYP4B1P13584 511 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 ACADSBP45954 432 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 ALDH7A1P49419 539 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 VAC14Q08AM6 782 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 CLPPQ16740 277 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 FAM98BQ52LJ0 330 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 BLOC1S3Q6QNY0 202 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 METTL7BQ6UX53 244 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 MFSD4AQ8N468 514 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 MCOLN3Q8TDD5 553 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 FRS2Q8WU20 508 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 MUL1Q969V5 352 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 AMBRA1Q9C0C7 1298 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 HOXD1Q9GZZ0 328 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 PAK1IP1Q9NWT1 392 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 ERVK-18Q9QC07 812 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 CSADQ9Y600 493 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 A0A1B0GTL3 188 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 A0A1W2PP18 115 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 GSTA4O15217 222 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 RFPL2O75678 378 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 CCNKO75909 580 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 FTH1P02794 183 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 TXNP10599 105 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 ITGB6P18564 788 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 MRPS15P82914 257 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 ITKQ08881 620 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 CAMK2BQ13554 666 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 HIST2H2ACQ16777 129 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 OTUD1Q5VV17 481 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 P2RY8Q86VZ1 359 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 GATAD2AQ86YP4 633 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 FAM86B1Q8N7N1 296 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 OR6Q1Q8NGQ2 317 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 MCFD2Q8NI22 146 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 EMID1Q96A84 441 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 CLIP3Q96DZ5 547 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 TRIM54Q9BYV2 358 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 OR12D3Q9UGF7 316 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 LIMD1Q9UGP4 676 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 UTS2RQ9UKP6 389 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 OR51F1A6NGY5 319 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 SLC1A7O00341 560 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 IDH3BO43837 385 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 NUAK1O60285 661 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 FADS2O95864 444 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 C1RP00736 705 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 EIF2S1P05198 315 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 PTPRAP18433 802 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 CD40LGP29965 261 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 ICAM3P32942 547 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 FSCN1Q16658 493 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 LRIT3Q3SXY7 679 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 RAB44Q7Z6P3 723 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 MICU2Q8IYU8 434 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 C2CD4AQ8NCU7 369 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 OR10Q1Q8NGQ4 319 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 OR13J1Q8NGT2 312 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 HBEGFQ99075 208 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 TUBB1Q9H4B7 451 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 AAR2Q9Y312 384 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 PMF1-BGLAPU3KQ54 211 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 ZNF831Q5JPB2 1677 aa11.48□□□□□ -0.57
HMGCS1-202ENST00000433297 COL2A1P02458 1487 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 A0A1W2PQ67 120 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms