RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 MXRA7P84157 204 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 KLC1Q07866 573 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 IKQ13123 557 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 RBBP5Q15291 538 aaKnown RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 CEP128Q6ZU80 1094 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 LRRC8DQ7L1W4 858 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 C12orf56Q8IXR9 622 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 DAW1Q8N136 415 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 ZCCHC9Q8N567 271 aaKnown RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 XXYLT1Q8NBI6 393 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 FIBINQ8TAL6 211 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 LRRC8CQ8TDW0 803 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 THAP4Q8WY91 577 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 CASP10Q92851 521 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 BICD1Q96G01 975 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 CFAP57Q96MR6 1250 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 NECTIN4Q96NY8 510 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 RBM15Q96T37 977 aaKnown RBP eCLIP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 CBWD1Q9BRT8 395 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 DENND2DQ9H6A0 471 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TLR8Q9NR97 1041 aaKnown RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TCFL5Q9UL49 500 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 GRID1Q9ULK0 1009 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 KCNK7Q9Y2U2 307 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 PTRH2Q9Y3E5 179 aaKnown RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 PARP14Q460N5 1801 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 A0A0G2JPF8 293 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 UBA6A0AVT1 1052 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 HNRNPCL3B7ZW38 293 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 F5H6K3 240 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 HNRNPCL1O60812 293 aaKnown RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TSC22D2O75157 780 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 SMIM24O75264 130 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 ENTPD5O75356 428 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 C4BPAP04003 597 aaKnown RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 HNRNPCL4P0DMR1 293 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TYRP14679 529 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TGM1P22735 817 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 MARK3P27448 753 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 GCAP28676 217 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 PTPN4P29074 926 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 PBX3P40426 434 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 METAP1P53582 386 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 CD83Q01151 205 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 SLC6A3Q01959 620 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 RUNX1T1Q06455 604 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 ALCAMQ13740 583 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TAF1BQ53T94 588 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TMTC4Q5T4D3 741 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 CDPF1Q6NVV7 123 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 Q6ZVL8 140 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 ARMCX2Q7L311 632 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TDRPQ86YL5 185 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 FAM9CQ8IZT9 166 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 GMCL1P1Q8NEA9 526 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 PLEKHO2Q8TD55 490 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 GAB3Q8WWW8 586 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 KIFAP3Q92845 792 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 EXT2Q93063 718 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 PRICKLE1Q96MT3 831 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 SMC6Q96SB8 1091 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 CITED2Q99967 270 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 SYT15Q9BQS2 421 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 LXNQ9BS40 222 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TRABDQ9H4I3 376 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TLE6Q9H808 572 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 DCLRE1BQ9H816 532 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 PALMDQ9NP74 551 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 PNPOQ9NVS9 261 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 SOHLH2Q9NX45 425 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 HSPBP1Q9NZL4 362 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 SENP1Q9P0U3 644 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 LNPEPQ9UIQ6 1025 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 FANCMQ8IYD8 2048 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 REV3LO60673 3130 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 NPIPB15A6NHN6 443 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 ISM1B1AKI9 464 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TIAF1O95411 115 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 PRLP01236 227 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 ITGA2BP08514 1039 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 RALAP11233 206 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 KLRC2P26717 231 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 GABRB3P28472 473 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 RPA3P35244 121 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 ARL3P36405 182 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 ZNF200P98182 395 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 SLC13A2Q13183 592 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 PDK1Q15118 436 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 ZNF528Q3MIS6 628 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 ZNF628Q5EBL2 1059 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 C1orf185Q5T7R7 199 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 OLFML1Q6UWY5 402 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 ACAD11Q709F0 780 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 RNF44Q7L0R7 432 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 FAM129CQ86XR2 697 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 CCDC117Q8IWD4 279 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TOP6BLQ8N6T0 577 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 DCBLD1Q8N8Z6 715 aa6.19□□□□□ -1.42
NIPAL3-205ENST00000432012 TMEM52Q8NDY8 209 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms