RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PAGE2BQ5JRK9 111 aa12.56□□□□□ -0.4
CPNE4-201ENST00000429747 SLCO6A1Q86UG4 719 aa12.56□□□□□ -0.4
CPNE4-201ENST00000429747 C11orf74Q86VG3 221 aa12.56□□□□□ -0.4
CPNE4-201ENST00000429747 KDM1BQ8NB78 822 aa12.56□□□□□ -0.4
CPNE4-201ENST00000429747 OR10A6Q8NH74 314 aa12.56□□□□□ -0.4
CPNE4-201ENST00000429747 SLC47A1Q96FL8 570 aa12.56□□□□□ -0.4
CPNE4-201ENST00000429747 BTN2A3PQ96KV6 586 aa12.56□□□□□ -0.4
CPNE4-201ENST00000429747 TSPAN18Q96SJ8 248 aa12.56□□□□□ -0.4
CPNE4-201ENST00000429747 CYP2S1Q96SQ9 504 aa12.56□□□□□ -0.4
CPNE4-201ENST00000429747 JUNP05412 331 aaKnown RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 EPB42P16452 691 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 ATP5C1P36542 298 aaKnown RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 ATP6V1E1P36543 226 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 CDKL1Q00532 357 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 GNA12Q03113 381 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 SPDYE7PQ495Y7 208 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 ARMC12Q5T9G4 340 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 TTC23LQ6PF05 361 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 MAVSQ7Z434 540 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 FAM9CQ8IZT9 166 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 STK40Q8N2I9 435 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 TRPV3Q8NET8 790 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 SH3KBP1Q96B97 665 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 TMIGD2Q96BF3 282 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 KLHL32Q96NJ5 620 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 REEP1Q9H902 201 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 SPON1Q9HCB6 807 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 ZDHHC7Q9NXF8 308 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 SH3BP1Q9Y3L3 701 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 KRT75O95678 551 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 CKMP06732 381 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 MAGP20916 626 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 UGT1A1P22309 533 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 UGT1A4P22310 534 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 CD68P34810 354 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 UGT1A3P35503 534 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 UGT1A5P35504 534 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 DIO3P55073 304 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 OGFOD2Q6N063 350 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 PGM2L1Q6PCE3 622 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 FAM151BQ6UXP7 276 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 OR8H2Q8N162 312 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 CENPIQ92674 756 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 TOP1MTQ969P6 601 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 OTULINQ96BN8 352 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 PRICKLE1Q96MT3 831 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 FOPNLQ96NB1 174 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 C16orf70Q9BSU1 422 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 OSBPL2Q9H1P3 480 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 IFT80Q9P2H3 777 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 GALPQ9UBC7 116 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 AURKAO14965 403 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 CNOT3O75175 753 aaKnown RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 TFPTP0C1Z6 253 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 UROSP10746 265 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 DBTP11182 482 aaKnown RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 GGT5P36269 586 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 TRAF3Q13114 568 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 CBX3Q13185 183 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 LEMD2Q8NC56 503 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 C2CD4AQ8NCU7 369 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 HAPLN3Q96S86 360 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 RASSF1Q9NS23 344 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 LRRC14BA6NHZ5 514 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 FZD9O00144 591 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 UMPSP11172 480 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 HOXA11P31270 313 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 STT3AP46977 705 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 HSPA7P48741 367 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 MAP2K5Q13163 448 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 TOP3AQ13472 1001 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 PWP1Q13610 501 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 TRIM74Q86UV6 250 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 TRIM73Q86UV7 250 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 SYT12Q8IV01 421 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 SIDT2Q8NBJ9 832 aaKnown RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 REXO4Q9GZR2 422 aaKnown RBP12.55□□□□□ -0.4
CPNE4-201ENST00000429747 ZNF696Q9H7X3 374 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 CIDEBQ9UHD4 219 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 PADI3Q9ULW8 664 aa12.55□□□□□ -0.4
CPNE4-201ENST00000429747 RSL1D1O76021 490 aaKnown RBP12.54□□□□□ -0.4
CPNE4-201ENST00000429747 KCNE1P15382 129 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 DGKAP23743 735 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 ALDH7A1P49419 539 aaKnown RBP12.54□□□□□ -0.4
CPNE4-201ENST00000429747 ZCCHC8Q6NZY4 707 aaKnown RBP12.54□□□□□ -0.4
CPNE4-201ENST00000429747 TMEM126BQ8IUX1 230 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 AADATQ8N5Z0 425 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 SPATA17Q96L03 361 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 SLC29A1Q99808 456 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 EPB41L1Q9H4G0 881 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 IPPKQ9H8X2 491 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 COQ6Q9Y2Z9 468 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 SAMHD1Q9Y3Z3 626 aaKnown RBP12.54□□□□□ -0.4
CPNE4-201ENST00000429747 STRCP1A6NGW2 1772 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 ZBTB42B2RXF5 422 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 ENPP3O14638 875 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 SERPIND1P05546 499 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 DGKQP52824 942 aa12.54□□□□□ -0.4
CPNE4-201ENST00000429747 RFTN1Q14699 578 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms