RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 BLKP51451 505 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 SLC14A1Q13336 389 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 DUPD1Q68J44 220 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 C8orf74Q6P047 294 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 KANSL1Q7Z3B3 1105 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 MMGT1Q8N4V1 131 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 PTCD2Q8WV60 388 aaKnown RBP22.12■■□□□ 1.13
PTPN18-205ENST00000428843 LRRC1Q9BTT6 524 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 KIFC1Q9BW19 673 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 SLC13A1Q9BZW2 595 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 ASB8Q9H765 288 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 MRM3Q9HC36 420 aaKnown RBP22.12■■□□□ 1.13
PTPN18-205ENST00000428843 UCKL1Q9NWZ5 548 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 ANAPC5Q9UJX4 755 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 SOX13Q9UN79 622 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 UTP11Q9Y3A2 253 aaKnown RBP22.12■■□□□ 1.13
PTPN18-205ENST00000428843 SLC30A1Q9Y6M5 507 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 DGKBQ9Y6T7 804 aa22.12■■□□□ 1.13
PTPN18-205ENST00000428843 SDR42E2A6NKP2 422 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 SMAPO00193 183 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 MTX2O75431 263 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 IVLP07476 585 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 ACVR1Q04771 509 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 NFATC2Q13469 925 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 SUZ12Q15022 739 aaKnown RBP22.11■■□□□ 1.13
PTPN18-205ENST00000428843 MARK2Q7KZI7 788 aaKnown RBP22.11■■□□□ 1.13
PTPN18-205ENST00000428843 AGGF1Q8N302 714 aaeCLIP22.11■■□□□ 1.13
PTPN18-205ENST00000428843 CEP112Q8N8E3 955 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 NOA1Q8NC60 698 aaKnown RBP22.11■■□□□ 1.13
PTPN18-205ENST00000428843 GDAP1Q8TB36 358 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 PEX13Q92968 403 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 HDAC10Q969S8 669 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 SCARF2Q96GP6 870 aaPredicted RBP22.11■■□□□ 1.13
PTPN18-205ENST00000428843 LRRC61Q9BV99 259 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 RAB17Q9H0T7 212 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 FAM96AQ9H5X1 160 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 CARS2Q9HA77 564 aaKnown RBP22.11■■□□□ 1.13
PTPN18-205ENST00000428843 TRIM39Q9HCM9 518 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 SMOXQ9NWM0 555 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 VPS18Q9P253 973 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 ATXN10Q9UBB4 475 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 CDV3Q9UKY7 258 aaKnown RBP22.11■■□□□ 1.13
PTPN18-205ENST00000428843 SUFUQ9UMX1 484 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 WDR87Q6ZQQ6 2873 aa22.11■■□□□ 1.13
PTPN18-205ENST00000428843 DNAH14Q0VDD8 3507 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 CCDC162PA2VCL2 907 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 OR51F1A6NGY5 319 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 TP73O15350 636 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 ITGALP20701 1170 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 NMBRP28336 390 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 C1orf61Q13536 156 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 KHDC1Q4VXA5 237 aaKnown RBP22.1■■□□□ 1.13
PTPN18-205ENST00000428843 PRRT3Q5FWE3 981 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 ZRANB3Q5FWF4 1079 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 FNBP1LQ5T0N5 605 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 CASC4Q6P4E1 433 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 DBX2Q6ZNG2 339 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 SNX20Q7Z614 316 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 ADGRG6Q86SQ4 1221 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 BBOF1Q8ND07 529 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 ZNF548Q8NEK5 533 aaPredicted RBP22.1■■□□□ 1.13
PTPN18-205ENST00000428843 LMX1AQ8TE12 382 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 CARD6Q9BX69 1037 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 TREX1Q9NSU2 369 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 WHRNQ9P202 907 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 SPASTQ9UBP0 616 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 CRLS1Q9UJA2 301 aa22.1■■□□□ 1.13
PTPN18-205ENST00000428843 PIEZO1Q92508 2521 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 AGAP14A8MT82 685 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 NDC80O14777 642 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 SLC30A4O14863 429 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 AQP9O43315 295 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 DNAJC6O75061 913 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 GOT2P00505 430 aaKnown RBP22.09■■□□□ 1.13
PTPN18-205ENST00000428843 PRSS56P0CW18 603 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 CTSEP14091 401 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 GNPDA1P46926 289 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 CDKN1CP49918 316 aaPredicted RBP22.09■■□□□ 1.13
PTPN18-205ENST00000428843 SLC7A5Q01650 507 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 RSPO4Q2I0M5 234 aaPredicted RBP22.09■■□□□ 1.13
PTPN18-205ENST00000428843 DNTTIP2Q5QJE6 756 aaKnown RBP22.09■■□□□ 1.13
PTPN18-205ENST00000428843 LDLRAP1Q5SW96 308 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 GPRC6AQ5T6X5 926 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 ARMC3Q5W041 872 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 CES3Q6UWW8 571 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 SLC25A45Q8N413 288 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 DDHD1Q8NEL9 900 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 ULK4Q96C45 1275 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 MFSD3Q96ES6 412 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 SIGLEC10Q96LC7 697 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 PWWP2AQ96N64 755 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 TMEM168Q9H0V1 697 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 OR2AG1Q9H205 316 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 SAMD15Q9P1V8 674 aa22.09■■□□□ 1.13
PTPN18-205ENST00000428843 PCYT1BQ9Y5K3 369 aaPredicted RBP22.09■■□□□ 1.13
PTPN18-205ENST00000428843 FLRT2O43155 660 aa22.08■■□□□ 1.13
PTPN18-205ENST00000428843 VEGFDO43915 354 aa22.08■■□□□ 1.13
PTPN18-205ENST00000428843 SH3BP5O60239 455 aa22.08■■□□□ 1.13
PTPN18-205ENST00000428843 CELA2BP08218 269 aaPredicted RBP22.08■■□□□ 1.13
PTPN18-205ENST00000428843 ZNF8P17098 575 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms