RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 SLX4IPQ5VYV7 408 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 SLC9A4Q6AI14 798 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 FAAH2Q6GMR7 532 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 BBS12Q6ZW61 710 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 TUBA1AQ71U36 451 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 VASH1Q7L8A9 365 aaPredicted RBP11.38□□□□□ -0.59
CECR3-201ENST00000428828 LYSMD3Q7Z3D4 306 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 CLVS1Q8IUQ0 354 aaPredicted RBP11.38□□□□□ -0.59
CECR3-201ENST00000428828 WDR75Q8IWA0 830 aaKnown RBP11.38□□□□□ -0.59
CECR3-201ENST00000428828 CCDC117Q8IWD4 279 aaPredicted RBP11.38□□□□□ -0.59
CECR3-201ENST00000428828 LSMEM2Q8N112 164 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 LILRB4Q8NHJ6 448 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 CALML6Q8TD86 181 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 SLC44A1Q8WWI5 657 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 ANKRD60Q9BZ19 345 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 PCDH9Q9HC56 1237 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 OLAHQ9NV23 265 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 THAP1Q9NVV9 213 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 TMEM248Q9NWD8 314 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 PRELID1Q9Y255 219 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 PLLPQ9Y342 182 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 HEMK1Q9Y5R4 338 aaPredicted RBP11.38□□□□□ -0.59
CECR3-201ENST00000428828 IKBKGQ9Y6K9 419 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 ZNF487B1APH4 448 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 GFRA2O00451 464 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 CHADO15335 359 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 CLDN11O75508 207 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 RHOCP08134 193 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 ERFP50548 548 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 TMPRSS15P98073 1019 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 OTUD4Q01804 1114 aaKnown RBP11.37□□□□□ -0.59
CECR3-201ENST00000428828 GK3PQ14409 553 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 C5orf22Q49AR2 442 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 IRAK1BP1Q5VVH5 260 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 OGFOD2Q6N063 350 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 PPP4R4Q6NUP7 873 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 GSTA5Q7RTV2 222 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 HPS6Q86YV9 775 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 CPA6Q8N4T0 437 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 TNIP2Q8NFZ5 429 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 OR52K2Q8NGK3 314 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 RILPQ96NA2 401 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 TUBA1CQ9BQE3 449 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 DNAJC28Q9NX36 388 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 ANKMY1Q9P2S6 941 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 EBF1Q9UH73 591 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 APOBEC2Q9Y235 224 aaKnown RBP11.37□□□□□ -0.59
CECR3-201ENST00000428828 ITM2BQ9Y287 266 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 FARP1Q9Y4F1 1045 aaPredicted RBP11.37□□□□□ -0.59
CECR3-201ENST00000428828 MYO18AQ92614 2054 aaKnown RBP11.37□□□□□ -0.59
CECR3-201ENST00000428828 NOTOA8MTQ0 251 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 MEI4A8MW99 385 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 APOC4-APOC2K7ER74 178 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 COPEO14579 308 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 APOC2P02655 101 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 TGM2P21980 687 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 SOX9P48436 509 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 KRT6CP48668 564 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 SLC10A2Q12908 348 aaPredicted RBP11.37□□□□□ -0.59
CECR3-201ENST00000428828 ATP1A4Q13733 1029 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 RUNX3Q13761 415 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 UBAP2LQ14157 1087 aaKnown RBP11.37□□□□□ -0.59
CECR3-201ENST00000428828 CYP2A13Q16696 494 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 FSCBQ5H9T9 825 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 CHST9Q7L1S5 443 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 C12orf40Q86WS4 652 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 DEFB107AQ8IZN7 70 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 SPERTQ8NA61 448 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 ACTL9Q8TC94 416 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 CSGALNACT1Q8TDX6 532 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 NKD2Q969F2 451 aaPredicted RBP11.37□□□□□ -0.59
CECR3-201ENST00000428828 TRIM56Q9BRZ2 755 aaKnown RBP11.37□□□□□ -0.59
CECR3-201ENST00000428828 CDH19Q9H159 772 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 MUC3BQ9H195 1237 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 DTLQ9NZJ0 730 aa11.37□□□□□ -0.59
CECR3-201ENST00000428828 TRIOO75962 3097 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 ANKRD36A6QL64 1941 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 GOLGA8CPA6NN73 597 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 H3BMQ9 156 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 TRIM24O15164 1050 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 NARSO43776 548 aaKnown RBP11.36□□□□□ -0.59
CECR3-201ENST00000428828 RAMP2O60895 175 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 STAMBPO95630 424 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 GABRB3P28472 473 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 ACVRL1P37023 503 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 CSKP41240 450 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 MAPKAPK2P49137 400 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 GAD2Q05329 585 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 PAFAH1B3Q15102 231 aaKnown RBP11.36□□□□□ -0.59
CECR3-201ENST00000428828 FAM182AQ5T1J6 154 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 RNF219Q5W0B1 726 aaPredicted RBP11.36□□□□□ -0.59
CECR3-201ENST00000428828 ANKRD26P1Q6NSI1 321 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 CXorf57Q6NSI4 855 aaKnown RBP11.36□□□□□ -0.59
CECR3-201ENST00000428828 ARHGAP36Q6ZRI8 547 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 NEK10Q6ZWH5 1172 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 SLC44A3Q8N4M1 653 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 TMEM102Q8N9M5 508 aaPredicted RBP11.36□□□□□ -0.59
CECR3-201ENST00000428828 OR7D4Q8NG98 312 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 GSDMBQ8TAX9 411 aa11.36□□□□□ -0.59
CECR3-201ENST00000428828 SERAC1Q96JX3 654 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms