RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 PILRAQ9UKJ1 303 aa17.24■□□□□ 0.35
DDR1-235ENST00000428153 TTLL3Q9Y4R7 772 aa17.24■□□□□ 0.35
DDR1-235ENST00000428153 FLNCQ14315 2725 aa17.24■□□□□ 0.35
DDR1-235ENST00000428153 PTPN13Q12923 2485 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 LILRA5A6NI73 299 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 EFCAB7A8K855 629 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 ZNF891A8MT65 544 aaPredicted RBP17.23■□□□□ 0.35
DDR1-235ENST00000428153 NUAK1O60285 661 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 RAD1O60671 282 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 GYPCP04921 128 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 ATP1A1P05023 1023 aaKnown RBP17.23■□□□□ 0.35
DDR1-235ENST00000428153 MAP4P27816 1152 aaKnown RBP17.23■□□□□ 0.35
DDR1-235ENST00000428153 IFI35P80217 286 aaPredicted RBP17.23■□□□□ 0.35
DDR1-235ENST00000428153 GBE1Q04446 702 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 PPIDQ08752 370 aaKnown RBP17.23■□□□□ 0.35
DDR1-235ENST00000428153 SLC14A2Q15849 920 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 FAM129CQ86XR2 697 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 PQLC3Q8N755 202 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 CTNNBL1Q8WYA6 563 aaPredicted RBP17.23■□□□□ 0.35
DDR1-235ENST00000428153 RTP4Q96DX8 246 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 ZMYND15Q9H091 742 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 TRIT1Q9H3H1 467 aaKnown RBP17.23■□□□□ 0.35
DDR1-235ENST00000428153 OCIAD1Q9NX40 245 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 CTTNBP2NLQ9P2B4 639 aa17.23■□□□□ 0.35
DDR1-235ENST00000428153 OAS3Q9Y6K5 1087 aaKnown RBP17.23■□□□□ 0.35
DDR1-235ENST00000428153 NAV2Q8IVL1 2488 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 FADS2P1A8MWK0 482 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 GRID2O43424 1007 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 EML2O95834 649 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 MMP2P08253 660 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 ANKRD34CP0C6C1 535 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 LIFP15018 202 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 MPSTP25325 297 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 CYP4F2P78329 520 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 SLC10A2Q12908 348 aaPredicted RBP17.22■□□□□ 0.35
DDR1-235ENST00000428153 CRTC2Q53ET0 693 aaPredicted RBP17.22■□□□□ 0.35
DDR1-235ENST00000428153 PLXDC1Q8IUK5 500 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 PHYKPLQ8IUZ5 450 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 NLGN4XQ8N0W4 816 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 CCNYQ8ND76 341 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 NLGN4YQ8NFZ3 816 aaPredicted RBP17.22■□□□□ 0.35
DDR1-235ENST00000428153 RNF157Q96PX1 679 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 SRPK1Q96SB4 655 aaKnown RBP17.22■□□□□ 0.35
DDR1-235ENST00000428153 ZSCAN5AQ9BUG6 496 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 ZFYVE1Q9HBF4 777 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 CBX8Q9HC52 389 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 TMEM184BQ9Y519 407 aaPredicted RBP17.22■□□□□ 0.35
DDR1-235ENST00000428153 PCYT1BQ9Y5K3 369 aaPredicted RBP17.22■□□□□ 0.35
DDR1-235ENST00000428153 ADGRG1Q9Y653 693 aa17.22■□□□□ 0.35
DDR1-235ENST00000428153 MN1Q10571 1320 aaPredicted RBP17.21■□□□□ 0.35
DDR1-235ENST00000428153 JCHAINP01591 159 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 KDELR1P24390 212 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 CD86P42081 329 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 TAS2R40P59535 323 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 ABHD18Q0P651 414 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 MAP7Q14244 749 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 CLCA4Q14CN2 919 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 SLC18A3Q16572 532 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 ANKS6Q68DC2 871 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 ZNF761Q86XN6 746 aaPredicted RBP17.21■□□□□ 0.35
DDR1-235ENST00000428153 CNTD1Q8N815 330 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 JPH3Q8WXH2 748 aaPredicted RBP17.21■□□□□ 0.35
DDR1-235ENST00000428153 KIAA1143Q96AT1 154 aaPredicted RBP17.21■□□□□ 0.35
DDR1-235ENST00000428153 TRIB3Q96RU7 358 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 XPO4Q9C0E2 1151 aaKnown RBP17.21■□□□□ 0.35
DDR1-235ENST00000428153 BRD8Q9H0E9 1235 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 MAGEE1Q9HCI5 957 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 TRIM39Q9HCM9 518 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 CPNE7Q9UBL6 633 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.21■□□□□ 0.35
DDR1-235ENST00000428153 COL12A1Q99715 3063 aa17.21■□□□□ 0.35
DDR1-235ENST00000428153 TRBV23OR9-2A0A075B6M9 112 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 GOLGA6L19H0YKK7 550 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 CHUKO15111 745 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 TOX3O15405 576 aaPredicted RBP17.2■□□□□ 0.34
DDR1-235ENST00000428153 ACP5P13686 325 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 XRCC1P18887 633 aaPredicted RBP17.2■□□□□ 0.34
DDR1-235ENST00000428153 GJC1P36383 396 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 UBE2IP63279 158 aaKnown RBP17.2■□□□□ 0.34
DDR1-235ENST00000428153 NFATC2Q13469 925 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 ZNF569Q5MCW4 686 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 SLC9A4Q6AI14 798 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 LUZP1Q86V48 1076 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.2■□□□□ 0.34
DDR1-235ENST00000428153 TRAM1L1Q8N609 369 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 PLD5Q8N7P1 536 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 CPLX3Q8WVH0 158 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 NCSTNQ92542 709 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 ATXN10Q9UBB4 475 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 KCNK6Q9Y257 313 aa17.2■□□□□ 0.34
DDR1-235ENST00000428153 SSU72P8A0A1W2PR75 194 aa17.19■□□□□ 0.34
DDR1-235ENST00000428153 KCNK1O00180 336 aa17.19■□□□□ 0.34
DDR1-235ENST00000428153 SLC25A14O95258 325 aaPredicted RBP17.19■□□□□ 0.34
DDR1-235ENST00000428153 C9P02748 559 aa17.19■□□□□ 0.34
DDR1-235ENST00000428153 TPM3P06753 285 aa17.19■□□□□ 0.34
DDR1-235ENST00000428153 ZFXP17010 805 aaPredicted RBP17.19■□□□□ 0.34
DDR1-235ENST00000428153 ZNF8P17098 575 aaPredicted RBP17.19■□□□□ 0.34
DDR1-235ENST00000428153 CCR10P46092 362 aa17.19■□□□□ 0.34
DDR1-235ENST00000428153 PPM1FP49593 454 aaPredicted RBP17.19■□□□□ 0.34
DDR1-235ENST00000428153 MC1RQ01726 317 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms