RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 SDCBP2Q9H190 292 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 MINDY3Q9H8M7 445 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 GKN1Q9NS71 199 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 MRPL39Q9NYK5 338 aaKnown RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 ZNF624Q9P2J8 865 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 PLLPQ9Y342 182 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 PCDHB1Q9Y5F3 818 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 SIN3BO75182 1162 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 CCNDBP1O95273 360 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 NELFEP18615 380 aaKnown RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 TCEA1P23193 301 aaKnown RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 L1CAMP32004 1257 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 RPIAP49247 311 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 ZNF132P52740 706 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 FPGSQ05932 587 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 ANXA8L1Q5VT79 327 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 SYPL2Q5VXT5 272 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 NAPRTQ6XQN6 538 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 DHDDSQ86SQ9 333 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 ZNF563Q8TA94 476 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 EXOSC8Q96B26 276 aaKnown RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 PTCD3Q96EY7 689 aaKnown RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 AGAP2Q99490 1192 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 HEPHQ9BQS7 1158 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 PAIP1Q9H074 479 aaKnown RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 SLC25A51Q9H1U9 297 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 MAPRE3Q9UPY8 281 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 COQ6Q9Y2Z9 468 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 RWDD3Q9Y3V2 267 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 HBS1LQ9Y450 684 aaKnown RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 HCRTO43612 131 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 POP4O95707 220 aaKnown RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 CRHR1P34998 444 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 NUP62P37198 522 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 EPS8Q12929 822 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 RALGDSQ12967 914 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 C16orf72Q14CZ0 275 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 SLC1A5Q15758 541 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 QPCTQ16769 361 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 FAM171BQ6P995 826 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 TRIM40Q6P9F5 258 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 TMEM139Q8IV31 216 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 FUKQ8N0W3 1084 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 BEND7Q8N7W2 519 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 SMYD1Q8NB12 490 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 ZCCHC10Q8TBK6 192 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 HEXDCQ8WVB3 486 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 ESAMQ96AP7 390 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 TRAPPC9Q96Q05 1148 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 EBPLQ9BY08 206 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 IPPKQ9H8X2 491 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 POLR3BQ9NW08 1133 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 CLN6Q9NWW5 311 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 SORCS3Q9UPU3 1222 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 LRCH1Q9Y2L9 728 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 C15orf41Q9Y2V0 281 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 ARVCFO00192 962 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 UGT2B15P54855 530 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 YBEYP58557 167 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-207ENST00000426142 ALG11Q2TAA5 492 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 C2orf27AQ580R0 203 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 TMEM220Q6QAJ8 160 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 DENND6AQ8IWF6 608 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 NRSN1Q8IZ57 195 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 ZNF540Q8NDQ6 660 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 AGAP11Q8TF27 550 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 TWIST2Q8WVJ9 160 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 C12orf42Q96LP6 360 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 CEP44Q9C0F1 390 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 MAGEH1Q9H213 219 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 LRTM1Q9HBL6 345 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 GGA2Q9UJY4 613 aa7.88□□□□□ -1.15
CTNND1-207ENST00000426142 SLIT2O94813 1529 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 CFHP08603 1231 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 CCL5P13501 91 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ITGA2P17301 1181 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 NAA20P61599 178 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 RPS24P62847 133 aaKnown RBP7.87□□□□□ -1.15
CTNND1-207ENST00000426142 CLEC20AQ6ZU45 233 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 FAM220AQ7Z4H9 259 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 SH3RF2Q8TEC5 729 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 FNIP1Q8TF40 1166 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 PPM1MQ96MI6 270 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 MAP4K5Q9Y4K4 846 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 A0A1B0GW55 424 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 MCIDASD6RGH6 385 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 SUV39H1O43463 412 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 DUX4L2P0CJ85 424 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 DUX4L3P0CJ86 424 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 DUX4L4P0CJ87 422 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 DUX4L5P0CJ88 424 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 DUX4L6P0CJ89 424 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 DUX4L7P0CJ90 424 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 TIE1P35590 1138 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 CHRNA4P43681 627 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 MAPKAPK2P49137 400 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 NDST2P52849 883 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 GAD2Q05329 585 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 GPM6BQ13491 265 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 KLHL35Q6PF15 583 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms