RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 UGT1A7Q9HAW7 530 aa10.26□□□□□ -0.77
MDC1-205ENST00000425072 UGT1A10Q9HAW8 530 aa10.26□□□□□ -0.77
MDC1-205ENST00000425072 UGT1A8Q9HAW9 530 aa10.26□□□□□ -0.77
MDC1-205ENST00000425072 FBXO6Q9NRD1 293 aaPredicted RBP10.26□□□□□ -0.77
MDC1-205ENST00000425072 ZDHHC3Q9NYG2 299 aa10.26□□□□□ -0.77
MDC1-205ENST00000425072 GGT7Q9UJ14 662 aa10.26□□□□□ -0.77
MDC1-205ENST00000425072 MTO1Q9Y2Z2 717 aaKnown RBP10.26□□□□□ -0.77
MDC1-205ENST00000425072 PSAT1Q9Y617 370 aa10.26□□□□□ -0.77
MDC1-205ENST00000425072 CACNA1BQ00975 2339 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 UBA6A0AVT1 1052 aaPredicted RBP10.25□□□□□ -0.77
MDC1-205ENST00000425072 A6NNZ2 444 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 RNGTTO60942 597 aaKnown RBP10.25□□□□□ -0.77
MDC1-205ENST00000425072 AP2A2O94973 939 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 SLC25A14O95258 325 aaPredicted RBP10.25□□□□□ -0.77
MDC1-205ENST00000425072 COL6A2P12110 1019 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 PKMP14618 531 aaKnown RBP10.25□□□□□ -0.77
MDC1-205ENST00000425072 BRAFP15056 766 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 STMN1P16949 149 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 KRT4P19013 534 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 RPS3P23396 243 aaKnown RBP eCLIP10.25□□□□□ -0.77
MDC1-205ENST00000425072 ACRV1P26436 265 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 TEAD1P28347 426 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 GABRB3P28472 473 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 SLC26A3P40879 764 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 GPR1P46091 355 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 CCR3P51677 355 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 LRRC14Q15048 493 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 TUBB8Q3ZCM7 444 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 ATP13A5Q4VNC0 1218 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 HENMT1Q5T8I9 393 aaKnown RBP10.25□□□□□ -0.77
MDC1-205ENST00000425072 KCTD16Q68DU8 428 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 FAM45BPQ6NSW5 357 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 PSAPL1Q6NUJ1 521 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 CNSTQ6PJW8 725 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 Q6ZS52 159 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 HORMAD1Q86X24 394 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 SRRM1Q8IYB3 904 aaKnown RBP10.25□□□□□ -0.77
MDC1-205ENST00000425072 PIANPQ8IYJ0 282 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 KRT222Q8N1A0 295 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 DCLK2Q8N568 766 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 GDAP1Q8TB36 358 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 FAM45AQ8TCE6 357 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 SCAMP4Q969E2 229 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 TSNARE1Q96NA8 513 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 LENG8Q96PV6 779 aaPredicted RBP10.25□□□□□ -0.77
MDC1-205ENST00000425072 GPR22Q99680 433 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 MCMBPQ9BTE3 642 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 TSSK1BQ9BXA7 367 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 EPHX3Q9H6B9 360 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 CNOT10Q9H9A5 744 aaKnown RBP10.25□□□□□ -0.77
MDC1-205ENST00000425072 SYTL2Q9HCH5 934 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 KCNK9Q9NPC2 374 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 CD320Q9NPF0 282 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 SMOXQ9NWM0 555 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 TAS2R13Q9NYV9 303 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 MARCH4Q9P2E8 410 aaPredicted RBP10.25□□□□□ -0.77
MDC1-205ENST00000425072 CTNNAL1Q9UBT7 734 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 EBF1Q9UH73 591 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 SLC39A10Q9ULF5 831 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 GRID1Q9ULK0 1009 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 SMG5Q9UPR3 1016 aaKnown RBP10.25□□□□□ -0.77
MDC1-205ENST00000425072 ANKRD6Q9Y2G4 727 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 CRYL1Q9Y2S2 319 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 ACOT9Q9Y305 439 aa10.25□□□□□ -0.77
MDC1-205ENST00000425072 FAM95CA0A1B0GW59 222 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 A0A1W2PPM1 405 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 A0A1W2PQU0 124 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 GAPDHSO14556 408 aaPredicted RBP10.24□□□□□ -0.77
MDC1-205ENST00000425072 KPNA5O15131 536 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 SPINT1O43278 529 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 DCXO43602 365 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 VPS26AO75436 327 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 RFPL1O75677 317 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 PAK4O96013 591 aaPredicted RBP10.24□□□□□ -0.77
MDC1-205ENST00000425072 GSTA1P08263 222 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 OR56A5P0C7T3 313 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 ATP1B2P14415 290 aaPredicted RBP10.24□□□□□ -0.77
MDC1-205ENST00000425072 CHRM3P20309 590 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 MSH3P20585 1137 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 FMO4P31512 558 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 CDKN1CP49918 316 aaPredicted RBP10.24□□□□□ -0.77
MDC1-205ENST00000425072 SERPINB8P50452 374 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 ADPRHP54922 357 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 RAB10P61026 200 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 PPP2R2AP63151 447 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 MPP1Q00013 466 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 SLC18A2Q05940 514 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 GAS6Q14393 721 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 INSCQ1MX18 579 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 USP39Q53GS9 565 aaKnown RBP10.24□□□□□ -0.77
MDC1-205ENST00000425072 TAF1BQ53T94 588 aaPredicted RBP10.24□□□□□ -0.77
MDC1-205ENST00000425072 TTMPQ5BVD1 217 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 HECTD2Q5U5R9 776 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 PTRHD1Q6GMV3 140 aaKnown RBP10.24□□□□□ -0.77
MDC1-205ENST00000425072 PNCKQ6P2M8 343 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 RFLNAQ6ZTI6 216 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 RAPH1Q70E73 1250 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 LDB1Q86U70 411 aaPredicted RBP10.24□□□□□ -0.77
MDC1-205ENST00000425072 TRIM69Q86WT6 500 aa10.24□□□□□ -0.77
MDC1-205ENST00000425072 GPATCH11Q8N954 259 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms