RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ACSS1Q9NUB1 689 aaPredicted RBP4.26□□□□□ -1.73
LINC01040-201ENST00000425048 GAGE10A6NGK3 116 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 HS3ST1O14792 307 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 TSHBP01222 138 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 PGM1P36871 562 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 GNAQP50148 359 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 SLC8A3P57103 927 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 TDGQ13569 410 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 FBXO47Q5MNV8 452 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 SLC22A25Q6T423 547 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 SUGP1Q8IWZ8 645 aaKnown RBP4.25□□□□□ -1.73
LINC01040-201ENST00000425048 APBB2Q92870 758 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 PHF21AQ96BD5 680 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 SCINQ9Y6U3 715 aa4.25□□□□□ -1.73
LINC01040-201ENST00000425048 HOXB5P09067 269 aa4.24□□□□□ -1.73
LINC01040-201ENST00000425048 MSH3P20585 1137 aa4.24□□□□□ -1.73
LINC01040-201ENST00000425048 CLDN20P56880 219 aa4.24□□□□□ -1.73
LINC01040-201ENST00000425048 BRD3Q15059 726 aa4.24□□□□□ -1.73
LINC01040-201ENST00000425048 UGP2Q16851 508 aa4.24□□□□□ -1.73
LINC01040-201ENST00000425048 USP41Q3LFD5 358 aa4.24□□□□□ -1.73
LINC01040-201ENST00000425048 MAP3K21Q5TCX8 1036 aa4.24□□□□□ -1.73
LINC01040-201ENST00000425048 ANO1Q5XXA6 986 aa4.24□□□□□ -1.73
LINC01040-201ENST00000425048 ATG16L1Q676U5 607 aa4.24□□□□□ -1.73
LINC01040-201ENST00000425048 PABPC5Q96DU9 382 aaKnown RBP4.24□□□□□ -1.73
LINC01040-201ENST00000425048 IWS1Q96ST2 819 aa4.24□□□□□ -1.73
LINC01040-201ENST00000425048 PYM1Q9BRP8 204 aaKnown RBP4.24□□□□□ -1.73
LINC01040-201ENST00000425048 TTYH1Q9H313 450 aaPredicted RBP4.24□□□□□ -1.73
LINC01040-201ENST00000425048 TAGLN3Q9UI15 199 aa4.24□□□□□ -1.73
LINC01040-201ENST00000425048 TEX13CA0A0J9YWL9 993 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 OR5K3A6NET4 321 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 H0YIN7 160 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 VCYO14598 125 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 KCNN4O15554 427 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 COX7A2P14406 83 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 GATA1P15976 413 aaPredicted RBP4.23□□□□□ -1.73
LINC01040-201ENST00000425048 BMXP51813 675 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 KRTCAP3Q53RY4 240 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 C6orf141Q5SZD1 244 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 BBS12Q6ZW61 710 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 LRRC8DQ7L1W4 858 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 AMER3Q8N944 861 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 PPHLN1Q8NEY8 458 aaKnown RBP4.23□□□□□ -1.73
LINC01040-201ENST00000425048 OR2T6Q8NHC8 308 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 SYT11Q9BT88 431 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 GLIS2Q9BZE0 524 aaPredicted RBP4.23□□□□□ -1.73
LINC01040-201ENST00000425048 KCNJ14Q9UNX9 436 aa4.23□□□□□ -1.73
LINC01040-201ENST00000425048 EXOGQ9Y2C4 368 aaKnown RBP4.23□□□□□ -1.73
LINC01040-201ENST00000425048 USP17L23D6RBM5 183 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 IGHV4-38-2P0DP08 117 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 ELF1P32519 619 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 APOBEC1P41238 236 aaKnown RBP4.22□□□□□ -1.73
LINC01040-201ENST00000425048 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 UFM1P61960 85 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 KCNJ10P78508 379 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 ASPRV1Q53RT3 343 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 FFAR4Q5NUL3 377 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 SH2D5Q6ZV89 423 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 RBM15BQ8NDT2 890 aaKnown RBP4.22□□□□□ -1.73
LINC01040-201ENST00000425048 ZCCHC10Q8TBK6 192 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 SLC44A1Q8WWI5 657 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 TBC1D20Q96BZ9 403 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 GMPPAQ96IJ6 420 aaPredicted RBP4.22□□□□□ -1.73
LINC01040-201ENST00000425048 USP44Q9H0E7 712 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 ITM2CQ9NQX7 267 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 ZHX2Q9Y6X8 837 aa4.22□□□□□ -1.73
LINC01040-201ENST00000425048 A0A0G2JNG1 304 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 C5orf60A6NFR6 353 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 TTC36A6NLP5 189 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 ANKRD66B4E2M5 251 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 FAM90A26D6RGX4 464 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 IFNL4K9M1U5 179 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 ANKRD28O15084 1053 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 BUD23O43709 281 aaKnown RBP4.21□□□□□ -1.74
LINC01040-201ENST00000425048 GNAZP19086 355 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 UGT1A1P22309 533 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 NR2F2P24468 414 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 PSMC2P35998 433 aaKnown RBP4.21□□□□□ -1.74
LINC01040-201ENST00000425048 UBA7P41226 1012 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 GRK6P43250 576 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 MBTD1Q05BQ5 628 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 MAD2L1Q13257 205 aaPredicted RBP4.21□□□□□ -1.74
LINC01040-201ENST00000425048 KIR2DS5Q14953 304 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 TRIM65Q6PJ69 517 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 PLXDC2Q6UX71 529 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 MFSD6Q6ZSS7 791 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 LONP2Q86WA8 852 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 ENAHQ8N8S7 591 aaPredicted RBP4.21□□□□□ -1.74
LINC01040-201ENST00000425048 MRGPRDQ8TDS7 321 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 GRHL3Q8TE85 626 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 KLHL15Q96M94 604 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 PSD2Q9BQI7 771 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 TMEM47Q9BQJ4 181 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 PCGF1Q9BSM1 259 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 LTB4R2Q9NPC1 389 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 ATAD3AQ9NVI7 634 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 SLC25A10Q9UBX3 287 aaPredicted RBP4.21□□□□□ -1.74
LINC01040-201ENST00000425048 AAR2Q9Y312 384 aaKnown RBP4.21□□□□□ -1.74
LINC01040-201ENST00000425048 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 PRAG1Q86YV5 1406 aa4.21□□□□□ -1.74
LINC01040-201ENST00000425048 EML2O95834 649 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms