RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TMEM135Q86UB9 458 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM72BQ86X60 149 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 UBE2J2Q8N2K1 259 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 ASCC1Q8N9N2 400 aaKnown RBP11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 OR13J1Q8NGT2 312 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 MCFD2Q8NI22 146 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 STON2Q8WXE9 905 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 TUBGCP3Q96CW5 907 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 VMP1Q96GC9 406 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 NSUN5Q96P11 429 aaKnown RBP11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 ACTR3BQ9P1U1 418 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 SNX10Q9Y5X0 201 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 A0A087WZ62 844 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 A8MT66 165 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 HS6ST1O60243 411 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 MITFO75030 526 aaPredicted RBP11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 CNTN5O94779 1100 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 GSNP06396 782 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 GPX3P22352 226 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 ARL4AP40617 200 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 ZNF135P52742 658 aaPredicted RBP11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 IL5RAQ01344 420 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 ILF2Q12905 390 aaKnown RBP11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 KCNAB2Q13303 367 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 ARHGEF6Q15052 776 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 DGUOKQ16854 277 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 ATAD3CQ5T2N8 411 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM45BPQ6NSW5 357 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 CTU1Q7Z7A3 348 aaKnown RBP11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM45AQ8TCE6 357 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 CELF6Q96J87 481 aaKnown RBP11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 PPM1MQ96MI6 270 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 ALG9Q9H6U8 611 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 CPNE5Q9HCH3 593 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 SARDHQ9UL12 918 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 SNX6Q9UNH7 406 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 TESMINQ9Y4I5 508 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 PDZK1P1A8MUH7 402 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 PGLSO95336 258 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 GOT2P00505 430 aaKnown RBP11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 MLNP12872 115 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 MTHFRP42898 656 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 MASP1P48740 699 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 GALK2Q01415 458 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 FOXD4Q12950 439 aaPredicted RBP11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 TRIP4Q15650 581 aaPredicted RBP11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 CYP20A1Q6UW02 462 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 PLD3Q8IV08 490 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 OR52K2Q8NGK3 314 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 ANKRD49Q8WVL7 239 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 S100ZQ8WXG8 99 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 ZNF560Q96MR9 790 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 AMBNQ9NP70 447 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 ANGPTL3Q9Y5C1 460 aa11.23□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC12A8A0AV02 714 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 ZNF99A8MXY4 864 aaPredicted RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 GNGT2O14610 69 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 MSCO60682 206 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 H2AFYO75367 372 aaKnown RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 HGFP14210 728 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 NFKB1P19838 968 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 RAB10P61026 200 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 CTAG1AP78358 180 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 GPLD1P80108 840 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 PUS10Q3MIT2 529 aaKnown RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 Q5BKY6 102 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 SULF1Q8IWU6 871 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 MCOLN3Q8TDD5 553 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 C19orf60Q96EN9 201 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 GPR22Q99680 433 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 MLPHQ9BV36 600 aaPredicted RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 GBA2Q9HCG7 927 aaPredicted RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 HPS4Q9NQG7 708 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 RASSF1Q9NS23 344 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 TRMT13Q9NUP7 481 aaKnown RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM118AQ9NWS6 357 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 TTC24A2A3L6 582 aaPredicted RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 AQP12BA6NM10 295 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 PIP5K1BO14986 540 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 KRT6AP02538 564 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 KRT6BP04259 564 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 NTRK1P04629 796 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 ALPLP05186 524 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 C7P10643 843 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 GGT5P36269 586 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 ZNF280AP59817 542 aaPredicted RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC6A3Q01959 620 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 TNFAIP2Q03169 654 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 TP53BP2Q13625 1128 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 SUZ12Q15022 739 aaKnown RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 SKIV2LQ15477 1246 aaKnown RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 ZNF470Q6ECI4 717 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 TAF2Q6P1X5 1199 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 C8orf82Q6P1X6 216 aaPredicted RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 LARP4Q71RC2 724 aaKnown RBP eCLIP11.22□□□□□ -0.611e-8■■■□□ 17.5
SEC61A1-202ENST00000424880 GDPD3Q7L5L3 318 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 AQP12AQ8IXF9 295 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 MICU2Q8IYU8 434 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 METTL4Q8N3J2 472 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms